Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3881 |
Symbol | |
ID | 5664265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4726801 |
End bp | 4727487 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238545 |
Product | tRNA guanosine-2'-O-methyltransferase |
Protein accession | YP_001503726 |
Protein GI | 157963692 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0312373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCCTG AACGTTTCGC CCGCATCAAC CAAATGCTTG ATAACCGCCA ACCCGATCTC ACCGTATGCC TAGATACCGT GCACAAGGGT AATAACATTG CCGCCGTGCT ACGTACCGCT GATGCGGCGG GCATACATGA AGTCCATGCG GTTTGGTCCG AACTAGAAAT GCGCGTATCG GGCAACACGG CGTCAGGCAG CCAACAATGG GTTAAGACTC GCGTACACCA GAGTATGGCG CAAGCTGTAG AAGCGTTTCG CGATCAAGAC ATGCAGATTC TAGCAACGAC CTTTTCAGAT ACCGCTGTCG ATTTCAGAGC GATTGATTAC ACCAAACCTA CAGTGGTTAT TATGGGTAAC GAGCGTGATG GCGTCAGCCC TGAAGGCATA GCTGCTGCGG ATCAACACAT CATCATTCCA ATGATAGGCA TGGTTCAATC ACTGAACGTA TCCGTTGCTG CCGCACTGAT TATGTATGAA GCTCAACGTC AACGCACTGA GGCAGGCATG TATGGCACGC GAAAATTGGA TGACGCCTAT TGCCAGATTA AGCTATTTGA GGAAGGGCAC CCTATTTATG CTAAGGCTTG TCGCCGCAAG AAGCTGCCTT ATCCAGCCAT AGATGCAGAA GGCCAAATTG TAGCGGATGA AGACTGGTGG CAAAAAATGC GGGCTCCTTC TGAATAA
|
Protein sequence | MSPERFARIN QMLDNRQPDL TVCLDTVHKG NNIAAVLRTA DAAGIHEVHA VWSELEMRVS GNTASGSQQW VKTRVHQSMA QAVEAFRDQD MQILATTFSD TAVDFRAIDY TKPTVVIMGN ERDGVSPEGI AAADQHIIIP MIGMVQSLNV SVAAALIMYE AQRQRTEAGM YGTRKLDDAY CQIKLFEEGH PIYAKACRRK KLPYPAIDAE GQIVADEDWW QKMRAPSE
|
| |