| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3880 |
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| Symbol | |
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| ID | 5664264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4726276 |
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| End bp | 4726659 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238544 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_001503725 |
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| Protein GI | 157963691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.196354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA AAATAATCAT CGCGACCGCT AAAGCGCCAC AAGCAATTGG CACTTACTCT
CAAGCGGTTA AAGTGGGTAG CACAGTTTAT TTATCAGGCC AAATCCCACT TGTTCCAGAG
ACCATGGAAA TGGTTAGCGA TGAGTTTGAA GCTCAGGTTG TGCAAGTCTT TGACAACCTA
ACTGCCGTTT GTGAAGCCGC TGGCGGCTCA TTAAGCGATA TCGTAAAGCT AAATATCTTT
ATGACTGACT TGAGCAACTT CGCTACCGTA AATGAAATTA TGGGTCGCTA CTTTGAGCAA
CCTTACCCAG CTCGTGCTGC TATTGGTGTT AAACAACTGC CAAAAGACTC ACTGGTTGAG
ATGGATGGAG TGATGGAGAT TTAA
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| Protein sequence | MAEKIIIATA KAPQAIGTYS QAVKVGSTVY LSGQIPLVPE TMEMVSDEFE AQVVQVFDNL
TAVCEAAGGS LSDIVKLNIF MTDLSNFATV NEIMGRYFEQ PYPARAAIGV KQLPKDSLVE
MDGVMEI
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