| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3879 |
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| Symbol | |
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| ID | 5664263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4724143 |
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| End bp | 4726248 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238543 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_001503724 |
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| Protein GI | 157963690 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTCT CAAGGAGTCT GCCTCAGGTT ATTTAGAACC TGAGCAGGTA
GAATTACTCA AGCAGGCCTA TCAGGTGGCG CGTGATGCCC ATGAAGGTCA GATGCGCACG
AGTGGCGAAC CTTATATTAC CCACCCGGTT GCGGTTGCCC GCATCCTGGC CGATATGCGT
CTCGATCATG AGACGCTTAT GGCCGCTCTC TTGCACGACA CTATCGAAGA CACCCCAGTA
ACCAAAGAAG AGCTGGCTGA AATATTCAGC GAGTCTATTG CTGAATTGGT TGAAGGCGTC
TCCAAGCTCG ATAAACTCAA ATTTCGCGAT AAGAAAGAAG CTCAAGCCGA AAACTTCCGC
AAAATGATGA TGGCGATGAC CCAAGATATT CGAGTCATCT TAATCAAGCT TGCCGATAGA
ACCCACAATA TGCGCACCTT AGGTGCTCTA CGGCCTGATA AGCGCCGTCG CATCGCCCGA
GAAACCCTCG AAATTTACGC CCCGATCGCC AACCGCCTTG GTATTCATAA TATTAAGAGT
GAGTTAGAGG AATTAGGTTT TCAAGCCTAC TACCCAATGC GATATCGTGT GCTTAGAGAG
GTGGTCAAAG CCGCTCGTGG TAATCGTAAA GAGCTTATCC TAAGCATTGA AGGCGCGATC
AATACTCGCC TTGAAGATAC TGGCCTAGAG GGCACAGTAA AGGGACGCGA GAAGAACCTT
TATTCCATCT ACAACAAGAT GCGTAATAAA GAGCTGCAGT TCCAAGAAGT CATGGATATC
TATGCCTTTA GAGTCATCGT TGACTCCATC GATACCTGTT ATCGCGTCAT GGGCGCCATG
CATGGCCTTT ATAAGCCACA TCCTGGTCGC TTCAAAGATT ATATCGCTAT CCCTAAAGCT
AACGGCTATC AGTCACTGCA TACTTCGCTT TTTGGCCCTC ACGGTGTACC GGTTGAGATC
CAAATTCGTA CCGAAGATAT GGACCAGATG GCAGATAAAG GGGTTGCGGC TCACTGGCTG
TACAAAAAAG GCAGCTCAGC CGAGCAAGGC ACCACCACTC AGGTACGTGC TCGTAAGTGG
ATGCAAAGCT TGTTGGAACT CCAACAAAGC GCGAGTACCT CTTTCGAATT TGTTGAAAAC
TTTAAGACTG AGCTCTTCCC TGAAGAGATC TACGTGTTCA CCCCTGAAGG CCGTATTTTA
GAGCTACCAG TGGGCGCTAC CCCGGTCGAC TTCGCTTACG AAGTCCACAC CGACGTGGGC
AATACCTGCG TAGGTGCCAA GGTAAATCGT CAAGCTTACC CGCTCAGTCA ACCACTGATC
TCCGGTCAGA CCGTAGAGAT CATTACCGCA AATGGCGCCC GTCCAAATGC GGCCTGGCTC
AACTTTGTAG TGACAGGTAA GGCACGAGCT AAAATCCGTC AGCTACTGAA AAGCCTGAAA
GAAGATGATG CCGTACTACT CGGTAAGCGA CTGCTTAATC ATGCGCTCGG TGAAACTAAG
TTAGATGGCT TATCTCAAGA GCAGATTGAT AAGGTCGTTC GTGATACCAA GCATGACTCA
CTCAACTCGC TACTTGCCGA TATTGGCCTA GGCAATGCCA TGAGCATTGT TATCGCACAG
CGACTGCTTG GGGATCAGCT CCATACAGAA GAGCACAAAG AAGTGCCTAC CATGTCTATT
CGTGGCGCAG AAGGCATGCT AGTGACCTTC GCTAACTGCT GTCGTCCAAT TCCAGGTGAC
GCGGTGATTG CCCATGTAAG CCCAGGTAAA GGCCTAGTGG TGCACATGGA AAGCTGCGCT
AACATTCGTG GCTATCAGGG TGAGCCAGAC AAGTACATAC CTGTACAGTG GGATAGTGCT
GAAGGCGTCG AGTACCAAGC TAACCTTAGG GTTGAAATTG TTAACCACCA AGGTGCATTA
GCCAAGATCA CCTCGATTGT AGCCTCTGCA GGTTCAAACA TTCATAACTT AACGACTGAA
GAGCGTGATG GGCGAGTTTT CCTCATCAAC CTACGTATTT CAGTGCGAGA CCGCATTCAT
TTGGCTAACG TGATGCGTCG GATCAGAGTA CTTCCAGAGG TACTTCGTAC ATCGAGAAAC
CGTTAA
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| Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILADMR
LDHETLMAAL LHDTIEDTPV TKEELAEIFS ESIAELVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKS
ELEELGFQAY YPMRYRVLRE VVKAARGNRK ELILSIEGAI NTRLEDTGLE GTVKGREKNL
YSIYNKMRNK ELQFQEVMDI YAFRVIVDSI DTCYRVMGAM HGLYKPHPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWL YKKGSSAEQG TTTQVRARKW
MQSLLELQQS ASTSFEFVEN FKTELFPEEI YVFTPEGRIL ELPVGATPVD FAYEVHTDVG
NTCVGAKVNR QAYPLSQPLI SGQTVEIITA NGARPNAAWL NFVVTGKARA KIRQLLKSLK
EDDAVLLGKR LLNHALGETK LDGLSQEQID KVVRDTKHDS LNSLLADIGL GNAMSIVIAQ
RLLGDQLHTE EHKEVPTMSI RGAEGMLVTF ANCCRPIPGD AVIAHVSPGK GLVVHMESCA
NIRGYQGEPD KYIPVQWDSA EGVEYQANLR VEIVNHQGAL AKITSIVASA GSNIHNLTTE
ERDGRVFLIN LRISVRDRIH LANVMRRIRV LPEVLRTSRN R
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