| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3861 |
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| Symbol | |
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| ID | 5664245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4693023 |
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| End bp | 4695473 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238525 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_001503706 |
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| Protein GI | 157963672 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0187524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTC GTACGTTTCT TAAATTCACC GCGGCGGCAG CGGCTGTAGC GACTGTTACA
GGTTGTGACA GTAGCAGTGC CAGCGATCCT CTGCCGACTC CGAGCGAGCC AGTGCTTCCT
CCAGTTGGAG AAGGTGTGAC ATGGGGCTCA TGTGCCACGA ACTGCTGGCA AGCATGTCCA
TTAAAAGTAC ACAGTAAAGA TGGCGTGATC ACGCGCATTG AAACTGAAGG CAAAGCTACG
GACGATTGGG ATAGTTTCGA GCATGAAATT CGCCCTTGCC CTCGCGGCCG CTCAATGCGT
CAGAAGGTTT ACAACCACGA TCGTCTTAAG TACCCAATGA AACGCGTAGG ACGTCGAGGT
TCTGATGAAT TCGTGCGTAT TAGCTGGCAA GAAGCTGTCT CTAGCGTCGC CGCAGCGATG
CAAAAGACCT ACGCTGAATA CGGTAAGAAC GCCATTTTCA TGCCTCTGGG CGGCGGTTCT
CACGATCTAA ATACTGGTGT GACTCAATCC AGTGTTCGTC TACTAAATAT GGCTGGCGGA
TGCCTTTTCT TCCATAACGA TTACTCTGCA TCTCAGTACC GTGAAGGCTC TGCTGGTATG
TACGGATACC TAGCATCTAA CGATGGTGAT ACCGTCGGTT TTTGGAATAC GGGCTCTAGC
CTGCGTAGCC TAGAAAATAG CGATCTGATG GTCTGCTTCG GCTATAACCC AATGGAAGCC
CGTTTGGGTG GCGCAGGTTC TGGTTATGAA TATTTGAATG TTAAGAAGAA AAATAACTTC
AAGACATACT ATATCGACCC ACGGTTTACC GATACAGCCG TAACCGCTAC CGATGAGTGG
GTGCCTATCC GCCCAGGTAC TGACGCAGCA TTATGTGAAG CATTAGCACA TGTATTGATA
GCAGATGGCT ACGCGGATAT CCCATTCCTT GAGCAGTACA CTTTTGGCTA CGATAAATAC
CAAGATTACA TCTTAGGTGT TACCGACGGC ATCGCTAAGA CGCCAGAGCG CGCCGAAAGT
ATCTGTGGTA TCCCGGCAGA GAAGATCCGT GAAATAGCTC AAGCAATTGG AGCCGCGTCA
GCGCCATTCG TGACACAGGG TTTCGGTCCA CAACGTCAAG GTAATGGTGA GAACAACGCA
CGTGCTGTGA TGATGCTGCC GTTACTCGTC GGTAAGATTA GTGGCGCGGG GACTAACCAC
GGCGGCACCC CTGGTAACGA TGGTTTATCC CATTACGCCA TGATGCCGGC TGATTCGCTC
AAAGATCTTA TGAACATGAA GATCATGGAC GTTACGATCC CAGCAGCATC ACATCTAGAC
GCCATCGAGT TCGGCACAGA AATGAAGCCG AGCACCCATG ATGTGCGTTA TTCAGATAAG
AGTCTGATGG ATGCAGATAC TCCGCTAGAA ACTAACGTAC GTTTCTTATG GTTAGCCTCA
TCCAATATGT TGGCTAACCA AAACGGTGAT ATCAACCGAG CTGACCGCCT ACTTAACGAC
GAGAGCCTAG TGGACTTTGT TGTTGTAGTT GAACAGCATA TGACGGCCTC AGCAAAGTAT
GCCGACATCA TCCTACCGGA AGTAAGCTGG CTTGAGATGT ATGACGTCAT CCAAAGCTAC
AACAAGATGG ACTGTGGTTC ATTGATGTAC GCCTACGGGA TCACCCCTGC TGTGGACCCT
ATGTTCGAAT GTAAGCCTGC CTATGACATC TGCCATATGA TCGCCAACGA GCTAGGCATA
GGCAGTAAAT TCACCAATGG TGGCATGACC TACTTAGATC AGGTGCGTAA GGTCTTTACC
GAGTTCAAGA AAAGCAATCC ATGGATCCAA GGTGACACCT TCGAAGAGTT TGTTAGCTTT
GGTCCTCAGC GCCAACCCGC TGGTGAGCAC CCCAACGTAG GTAAGATCCG CGACTTCGTC
GCCAACCCTG AACAAAACCC TCTAGGTACA CCTAGCGGCA AGGTCGAGAT CTACTCTCAA
TATTTCGAGA GTAAGCAGAG CCAAGCTGAA GGCACCGACG AGATCAACCC ACTGCCCGTC
TACTTTGCCT GTGACGAGTC ATATGAAGAT GCTACTGCTG CAGAATACCC GCTGCAGTGC
ATTAACTATC ACGGTAAACA TAGCGCTCAC AGTATCCATG CCAGTACACC TTGGCTCAAT
GAAGTACTCG AGCATCACCT ATGGCTAAAC CCAATAGATG CAGGTGCTGC AGGCCTTATC
AATGGCCAAA AGGTCATTGT TGAGAGCCGC AGAGGCAAGC TCGAAATTAC CGCTCGCGTC
ACTCCTAGAA TCGTCCCTGG TGTTGTGGCA ATGCCTCAAG GCCAATGGCG TCGTATGAAA
GGGGATATCG ATGTGGGTGG CTGCGCAAAT ACCCTGACCG ACAGTAAGCC TAGTCCGGTT
GCTAAGTCAT TCCGTTCTAA TACTAACCGA GTCAGAGTTT ACTCGGCATA G
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| Protein sequence | MERRTFLKFT AAAAAVATVT GCDSSSASDP LPTPSEPVLP PVGEGVTWGS CATNCWQACP
LKVHSKDGVI TRIETEGKAT DDWDSFEHEI RPCPRGRSMR QKVYNHDRLK YPMKRVGRRG
SDEFVRISWQ EAVSSVAAAM QKTYAEYGKN AIFMPLGGGS HDLNTGVTQS SVRLLNMAGG
CLFFHNDYSA SQYREGSAGM YGYLASNDGD TVGFWNTGSS LRSLENSDLM VCFGYNPMEA
RLGGAGSGYE YLNVKKKNNF KTYYIDPRFT DTAVTATDEW VPIRPGTDAA LCEALAHVLI
ADGYADIPFL EQYTFGYDKY QDYILGVTDG IAKTPERAES ICGIPAEKIR EIAQAIGAAS
APFVTQGFGP QRQGNGENNA RAVMMLPLLV GKISGAGTNH GGTPGNDGLS HYAMMPADSL
KDLMNMKIMD VTIPAASHLD AIEFGTEMKP STHDVRYSDK SLMDADTPLE TNVRFLWLAS
SNMLANQNGD INRADRLLND ESLVDFVVVV EQHMTASAKY ADIILPEVSW LEMYDVIQSY
NKMDCGSLMY AYGITPAVDP MFECKPAYDI CHMIANELGI GSKFTNGGMT YLDQVRKVFT
EFKKSNPWIQ GDTFEEFVSF GPQRQPAGEH PNVGKIRDFV ANPEQNPLGT PSGKVEIYSQ
YFESKQSQAE GTDEINPLPV YFACDESYED ATAAEYPLQC INYHGKHSAH SIHASTPWLN
EVLEHHLWLN PIDAGAAGLI NGQKVIVESR RGKLEITARV TPRIVPGVVA MPQGQWRRMK
GDIDVGGCAN TLTDSKPSPV AKSFRSNTNR VRVYSA
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