| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3859 |
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| Symbol | |
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| ID | 5664243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4690418 |
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| End bp | 4691281 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238523 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_001503704 |
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| Protein GI | 157963670 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00158078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAGAA TCTTACTAAA AATCGGAGTG TTAATAGCCT TCTGCGCTAC CACACTCCTT
GCTGCGCCAA GCGCTCAAGC CGACCAAGTC GCTACTCCTT TAGAGCAGCA ACTGGTTAAT
AAATTCACCG AGGCTAACTA CTCTAAAAAA GGTGCTGACA CCTGTCTTAT GTGTCACAAG
AAGTCTCAAC CCGTTATGGC GATTTTCAAT TCGCCACACG GTGATACCAA CCAAGGCCCT
ATGGCTGGTC TTCAGTGTGA AGCCTGCCAC GGACCACAAG GTAAGCACAA AGGTAAAAAC
GAGCCCATGC TCACCTTTGG TGATGAGCTA TCCGTCGAAG GCCGTAACAG TGTTTGTGAG
TCTTGCCACA GCCAAGAGCA CACCCCGTTC CATGACCAAG CCTGCAGTGA TTGTCACAAC
ATTCACCAAG CACAGTTAAC TGCAGAGCAA CCTCAAGCGC AGTGCGCAAA TTGCCATATG
CAGCAAGAGT CTGCTCAATT TAAGCGCTCG ACTCACTTAG AGCACTTAGT CTGCAGTGAC
TGCCATAACC CTCATGAAGA AGCGCCGCTA TCAGTTAATG ACACCTGTTA CAGCTGTCAT
GCCGAGAAGC GCGGACCCGC CTTATGGGAG CACGCTCCTG TTGTTGAGGA CTGCACCACC
TGCCATAACC CTCATGGCTC CGTTAACGAC AACCTACTTA ACAGTCGTGC ACCGCAATTA
TGCCAAAGCT GTCATAGCCA AGCTGGCCAC CCAGGTGATG TGCATAACAA CTTAGATGGT
TTCACTCAGG GTCAATCGTG CATGAACTGC CACAGCAAAA TTCATGGTTC GAACCACCCT
GCTGGTCACT TATTTACAAA ATAG
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| Protein sequence | MMRILLKIGV LIAFCATTLL AAPSAQADQV ATPLEQQLVN KFTEANYSKK GADTCLMCHK
KSQPVMAIFN SPHGDTNQGP MAGLQCEACH GPQGKHKGKN EPMLTFGDEL SVEGRNSVCE
SCHSQEHTPF HDQACSDCHN IHQAQLTAEQ PQAQCANCHM QQESAQFKRS THLEHLVCSD
CHNPHEEAPL SVNDTCYSCH AEKRGPALWE HAPVVEDCTT CHNPHGSVND NLLNSRAPQL
CQSCHSQAGH PGDVHNNLDG FTQGQSCMNC HSKIHGSNHP AGHLFTK
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