| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3858 |
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| Symbol | |
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| ID | 5664242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4688627 |
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| End bp | 4689748 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238522 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001503703 |
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| Protein GI | 157963669 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0581351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TTACCGATAT TGAAGTGCTC CACCTACGCG TTCCAGCAAT GGATGCCGAT
TGTGAATGGG GCGAAGACGC CGTCATCGTT AAAGTGCATA CCGATAAAGG TATCGTAGGT
GTGGGCGAAG CCGACTCTAG CCCGCTAGTG GTTCAAGCTT GTATCGAAGC GCCACAAACT
AACTTCTACT GCAACGGTCT TAAGCGTCTG CTGATCGGTG AAAATGCGCT GGAAATCGAG
CGCCTGTGGA ACAAGATGTA CTGGGGTTCA AACTACATGG GTCGTCGCGG TGCTGGCATC
CATGCCATTA GTGCTATCGA CATCGCTCTG TGGGATATCG CAGGTCAGTT CTACGGTGTA
CCAGTACACA CGCTACTTGG CGGTAAGTAC CGCGACAAGA TCCGTTGTTA CGGTACCTTT
ATTCCTGCCG ACAAGCCTGA AGACAACGTG GCTATTGTGC AGGGCTTGAA AGACCAAGGT
TTCTCTAGCA TTAAGTTTGG TGGCGGCGTG ATGGGCGATG ACCCAGACAC CGACTACGCT
ATCGTTAAAG CGGTGCGTGA AGCGGCAGGT CCAGAGATGG AAGTGCAGAT CGACTTAGCG
TCTAAGTGGC ACACCTGTGG TCATTCAGCC ATGATGGCGA AACGTCTAGA AGAGTTTAAC
CTCAACTGGA TTGAAGAGCC GGTACTAGCA GACAGCCTGA TCAGCTATGA AAAGCTGTCA
CGTCAGGTAT CGCAAAAGAT TGCTGGCGGT GAGTCGCTAA CCACTCGTTA CGAGTTCCAA
GAGTTCATCA CTAAGTCTAA CGCCGATATC GTTCAGCCAG ACATCACCCG TTGTGGTGGT
ATCACTGAAA TGAAGAAGAT CTACGACATC GCGCAGATGA ATGGTACTCA GCTGATCCCT
CATGGTTTCA GCACCGGCAT TCTGTTGCAT GCTTCGGTAC ACTTCTTAGC GGCTTGCGAG
CAAGGTACGC TGATGGAGTT CTCTCAGAGC AGCAGCCCAC TATTCACTAG CTTAGTGAAA
AACCAGCTGC AGTTCGATAA TGGCTTTGTG GCCGTATCTG ACGCACCAGG TTTAGGTATC
GAGCTAGACG AAGAGTTAAT TGCCAAGTAC CGCGTTAACT AG
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| Protein sequence | MLKITDIEVL HLRVPAMDAD CEWGEDAVIV KVHTDKGIVG VGEADSSPLV VQACIEAPQT
NFYCNGLKRL LIGENALEIE RLWNKMYWGS NYMGRRGAGI HAISAIDIAL WDIAGQFYGV
PVHTLLGGKY RDKIRCYGTF IPADKPEDNV AIVQGLKDQG FSSIKFGGGV MGDDPDTDYA
IVKAVREAAG PEMEVQIDLA SKWHTCGHSA MMAKRLEEFN LNWIEEPVLA DSLISYEKLS
RQVSQKIAGG ESLTTRYEFQ EFITKSNADI VQPDITRCGG ITEMKKIYDI AQMNGTQLIP
HGFSTGILLH ASVHFLAACE QGTLMEFSQS SSPLFTSLVK NQLQFDNGFV AVSDAPGLGI
ELDEELIAKY RVN
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