Gene Spea_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3843 
SymbolpyrE 
ID5664227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4670794 
End bp4671435 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID641238507 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001503688 
Protein GI157963654 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCCTAG AACGTCAGGT ACTTCGATTT 
GGCGAATTTA CGTTAAAGTC AGGCCGCACT AGCCCTTATT TCTTTAACGC TGGCCTGTTT 
AACACTGGCC GTGACTTAGC GCGTCTAGGT CGTTTCTACG CAGCGGCACT AGTTGACTCT 
GGTATTGAGT ATGACTTGCT ATTTGGCCCT GCATACAAAG GTATTCCAAT CGCGACCACG 
ACTGCTGTAG CACTGTGTGA TCACCACGAT ATCGACATGC CTTACTGCTT TAACCGTAAA 
GAGAAGAAAG ATCACGGCGA AGGTGGCAGC CTAGTAGGTA GCGAACTTCA AGGGCGCGTA 
ATGCTAGTTG ATGACGTGAT CACTGCTGGT ACGGCGATTC GTGAGTCTAT GGAGATCATT 
GCTGCGCACA AGGCATCACT TGCGGGTGTG TTGATTGCGT TAGACCGTCA AGAGAAGGGC 
AAGGGCGAGC TTTCTGCTAT TCAAGAAGTT GAGCGTGATT TTGGTTGTGA CATCGTTTCA 
ATCATCAAGC TTGAAGACTT GATCAATTAC TTGTCTGAAA AATCAGGCAT GGAAGCGCAG 
CTTGCTTCAG TAAGCGCTTA CCGCGACCAG TATGGGATTT AA
 
Protein sequence
MKAYQREFIE FALERQVLRF GEFTLKSGRT SPYFFNAGLF NTGRDLARLG RFYAAALVDS 
GIEYDLLFGP AYKGIPIATT TAVALCDHHD IDMPYCFNRK EKKDHGEGGS LVGSELQGRV 
MLVDDVITAG TAIRESMEII AAHKASLAGV LIALDRQEKG KGELSAIQEV ERDFGCDIVS 
IIKLEDLINY LSEKSGMEAQ LASVSAYRDQ YGI