| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3826 |
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| Symbol | |
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| ID | 5664210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4650938 |
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| End bp | 4652338 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238490 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001503671 |
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| Protein GI | 157963637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGA CACTATATGA GAAAGTATGG GACAGCCATG TGGTTGTCGC CCCTGAAGGC
GAAGCGCCCA TTATCTATGT TGATAGGCAT CTAGTGCATG AGGTGACCTC ACCCCAAGCA
TTTAGTGGAG TTAAGGTCGC TGGCCGACAG TTACGTGCGC CACAGAAAAC CTTCGCCACC
ATGGATCACA ACACATCCAC AACCAGCGCA AGCTTAGATG CACTTAGCCC TATGGCGCGT
ACTCAGGTTG AAACTCTAGA GCAAAACTGT AAAGAGTTCG GCGTTCGCCT CTATGATATT
CACCATAAGA ATCAAGGTAT TGTGCATGTG ATGGGCCCAG AGCTTGGCAT TACTTTGCCG
GGAACTGTGA TTGTGTGTGG TGACTCGCAT ACCGCCACCC ATGGCGCCTT TGGTGCTCTT
GCATTTGGTA TCGGTACATC GGAAGTTGAG CATGTGATGG CGACGCAGAC ACTACGTCAG
CTAAAGGCCA AGACCATGAA GATTGAAGTT CGTGGTCATG TGGCTTCTGG GATCACCGCT
AAAGATATCG TGTTAGCGAT TATTGGTAAA ATTGGCATGG ATGGCGGCAC AGGTTATGTG
GTTGAGTTCT GTGGTGAAGC AATCGAGGCG CTGAGCATGG AAGGCCGCAT GACAGTATGC
AATATGGCCA TCGAGATGGG CGCAAAGGCA GGCATGATAG CCCCAGATGC GACGACGGCT
GAATACCTTG AAGGTCGTGA GTTTTCACCA AAAGGTGAAA GCTGGAGCCA AGCCGTTGCT
GCTTGGGAGC AGTTAAAAAC CGACGAAGGT GCAGTATTTG ATGCCAGTGT GGTGTTAGAT
GCCATAGATA TTGCACCGCA ACTGACTTGG GGAACCAACC CAGGCCAGGT GGTTGCTATC
GATCAGTTAG TGCCAAACCC ACTCGATGCC ACCAACTCTA CCGTTCGTAG TAGTATCGAG
AAGGCGCTGG AGTATGTCGA TTTAACAGCG GGCACCTTGA TGACAGATGT CAGTATCAAT
AAAGTATTTA TTGGTTCTTG TACTAACTCT CGCATTGAGG ATCTTCGCGC CGCAGCGGTT
CACGCCAAGG GGCGCAAGGT CGCTGATGGG GTAAAGGCTA TTGTTGTACC AGGCTCAGGG
CTAGTTAAAG AGCAAGCCGA GGCTGAAGGT TTAGATAAGA TCTTTACTGA TGCCGGTTTT
GAATGGCGCT TACCGGGTTG CTCTATGTGT TTAGCTATGA ATGACGATAA ATTGGAAGCG
GGCGATCGCT GCGCGTCGAC TAGTAATCGT AATTTTGAGG GCCGACAAGG GCGTGGCAGC
CGTACTCACT TAGTGAGCCC TGCTATGGCC GCCGCTGCTG CGGTAGCCGG ACACTTTGTT
GATATTCGCA AACCATACTA G
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| Protein sequence | MAKTLYEKVW DSHVVVAPEG EAPIIYVDRH LVHEVTSPQA FSGVKVAGRQ LRAPQKTFAT
MDHNTSTTSA SLDALSPMAR TQVETLEQNC KEFGVRLYDI HHKNQGIVHV MGPELGITLP
GTVIVCGDSH TATHGAFGAL AFGIGTSEVE HVMATQTLRQ LKAKTMKIEV RGHVASGITA
KDIVLAIIGK IGMDGGTGYV VEFCGEAIEA LSMEGRMTVC NMAIEMGAKA GMIAPDATTA
EYLEGREFSP KGESWSQAVA AWEQLKTDEG AVFDASVVLD AIDIAPQLTW GTNPGQVVAI
DQLVPNPLDA TNSTVRSSIE KALEYVDLTA GTLMTDVSIN KVFIGSCTNS RIEDLRAAAV
HAKGRKVADG VKAIVVPGSG LVKEQAEAEG LDKIFTDAGF EWRLPGCSMC LAMNDDKLEA
GDRCASTSNR NFEGRQGRGS RTHLVSPAMA AAAAVAGHFV DIRKPY
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