| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3815 |
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| Symbol | |
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| ID | 5664199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4638663 |
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| End bp | 4640042 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238479 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001503660 |
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| Protein GI | 157963626 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGGG TTTCTTTAGC CGAGTTAGCG ACGCGCCTGA ATGGCCAGTT GATTGGAGAT
GATCTGCCAA TCGATAGCGT CTCTAGCGAC AGTCGAGCAG TAGATAGCAA GACGCTTTTT
GTCGCATTGA AAGGTGATAA TTTTGATGGT CATAACTTCG CTCAGGCAGC GGTCGATGCT
GGTGCGAACG CATTGTTGGT AGAAAGAGAG TTACCGATAG ACGCCGCACA AATTGTCGTG
GCAAATAGCC AGCGTGCGAT GGGCGAAATT GGCGCCTATG TGCGTGAACA GCTTGCGCCA
ACTTGTGTTG CCTTAACCGG TTCAAATGGT AAGACTAGCG TAAAAGAGAT GATAGCGACT
ATCTTGTCGC AACAGCATCG AGTGCTCTAT ACCGCGGGTA ACTTCAATAA CGAAATTGGT
GTGCCGTTAA CCTTGCTGAG ATTGAAGCAA GGTGATGAGT TTGGCGTATT TGAGCTTGGC
GCTAACCACG CAGGTGAGAT TGACTATACC TCTGGTTTGG TCAAACCGAG TGTGGCCATG
GTGAATAACG TCGCTTCGGC TCACCTTGAA GGGTTCGGCT CTTTAGAGGG GGTGGCTAAG
GCTAAGTCTG AGATCTTTAA TCACGTTACC GTAGGCGGTA CAGCAGTGAT TAATGCCGAT
GATGCATTTG CTGATGTCAT GCTTCAGGCG TCTAGCCACG TTAAGCAGTT ATGTTTTGGT
GTTAAAAATG AAGCGTCGAG AGATCTCGAT GTTTTTGCTA CAGATTTGAT TGCAGATTCT
TACGGACGTT ATGCCTTTAG CCTTTGCTAC GGTGCAGAAG TTCATAGAGT TGAGTTGCCG
TTGGCTGGGC GTCACCAGGT GTCTAATGCG CTAGCGGCGA CCAGTATCTG TTTAGCATTA
GGTTTGTCTT TGGCTCATAT TTGCCAAGGA CTTAGCCAAC TAAAACCTGT GAAGGGCCGC
ATGCTGCCAA GTGTACTTGG GCGGGTGACG GTAATCGATG ATAGCTATAA CGCAAATCCG
GCTTCAGTGG GCGCAGCTAT CGACTGGCTT CAAGAAATTA AAGGAAATCG CTGTTTAGTA
CTGGGCGATT TGGGCGAATT AGGCGACAAT GCCGCCCTTT TGCATCGCGA GCTTGGGGCG
TTAGCCAAGG CAAAAGGCGT AAATTCGCTG TTTTGTGTCG GTACGCTAAG CGAGGGTGCG
AGTCATGCTT TTGGTTCCAA ACACTATCAA GATATTGATG ATTTGGTTGC AGGATTAATT
CAATACATTA ATGAATTACC TGCCGAAATT ACCGTGTTAG TGAAAGGTTC TCGCAGTGCG
AGAATGGAAC GTGTAGTAGA AGCTTTAACA ACGGCCTTTG GTCGCGGGGA GTTTGTTTAA
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| Protein sequence | MIRVSLAELA TRLNGQLIGD DLPIDSVSSD SRAVDSKTLF VALKGDNFDG HNFAQAAVDA
GANALLVERE LPIDAAQIVV ANSQRAMGEI GAYVREQLAP TCVALTGSNG KTSVKEMIAT
ILSQQHRVLY TAGNFNNEIG VPLTLLRLKQ GDEFGVFELG ANHAGEIDYT SGLVKPSVAM
VNNVASAHLE GFGSLEGVAK AKSEIFNHVT VGGTAVINAD DAFADVMLQA SSHVKQLCFG
VKNEASRDLD VFATDLIADS YGRYAFSLCY GAEVHRVELP LAGRHQVSNA LAATSICLAL
GLSLAHICQG LSQLKPVKGR MLPSVLGRVT VIDDSYNANP ASVGAAIDWL QEIKGNRCLV
LGDLGELGDN AALLHRELGA LAKAKGVNSL FCVGTLSEGA SHAFGSKHYQ DIDDLVAGLI
QYINELPAEI TVLVKGSRSA RMERVVEALT TAFGRGEFV
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