Gene Spea_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3793 
Symbol 
ID5664178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4607928 
End bp4608551 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID641238453 
Productsterol-binding domain-containing protein 
Protein accessionYP_001503639 
Protein GI157963605 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTG ACTTGTCACT ACTGACCTGT GCCGCGATTG AGATCAGCTT AAACAAGCTG 
ATCTCTCAAT CTCCTGAAGA TTACGCTAAG TTGCGTAATC TTCATGGCAA AGTGCTATGC 
ATCCAGCTTT CACAGCTTAG CTGGCCGCTA TACTTTCTGT TTGCTAAAGA GATCCAAGTC 
TTCTCGCGCT ATGAAGGCGA AGTCACGACC AAAGTCAATG CCGATGCTAC CACCCTCTAC 
CAACTAACTG AGGGGGCAAA TCTCACCGAA CTGATCAAAC AAGATAAGCT CAGTCTCGAG 
GGTGATCTCA GCTTATTACA AACATTCAGC CATTATATGC AACAAGTTGA AGTCGACTTT 
GCAGAGCCTC TATCGCACTA CATTGGTGAT GCCCCGACCC ACTTTATTCA TCAGGGGCTC 
AAACAAGCCA AGCAAGATGT CACTAAGGTT CTACGTAAGA CACGTTCACA TCTTGGACAA 
CTGACCACTG AAGAGTATCG ACTCGCTCCC CATAAGCTCG AATATATCTA TTTAAGTGAT 
AGAATCGATG ACTTAGCCGC CGATGTCGAG GCGACAGCTA CACGGATTGA CCAGCTTATC 
AACAGGGTAA AAACACAACC ATGA
 
Protein sequence
MSRDLSLLTC AAIEISLNKL ISQSPEDYAK LRNLHGKVLC IQLSQLSWPL YFLFAKEIQV 
FSRYEGEVTT KVNADATTLY QLTEGANLTE LIKQDKLSLE GDLSLLQTFS HYMQQVEVDF 
AEPLSHYIGD APTHFIHQGL KQAKQDVTKV LRKTRSHLGQ LTTEEYRLAP HKLEYIYLSD 
RIDDLAADVE ATATRIDQLI NRVKTQP