| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3782 |
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| Symbol | hslU |
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| ID | 5664167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4597819 |
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| End bp | 4599144 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238442 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001503628 |
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| Protein GI | 157963594 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.268349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA TGACACCACG TGAAATTGTT CACGAGCTAG ATAGCCACAT TATCGGTCAA
CAAAAAGCTA AGCGCTCTGT CGCTATCGCT CTGCGTAACC GCTGGCGCCG TATGCAGCTT
GCTGCTGACT TACGTCAAGA AGTGACGCCA AAGAACATCC TAATGATTGG CCCAACCGGT
GTAGGTAAAA CTGAGATTGC TCGTCGTCTA GCTCGCCTAG CTAAAGCGCC ATTTATTAAA
GTTGAAGCCA CTAAGTTCAC CGAAGTAGGC TATGTTGGTA AAGAAGTCGA GCAGATCATT
CGCGATCTAA CCGATTCGGC TATCAAGCTA ACCCGCGAAG AGCAAATCAA AAAATGTAAG
TTCCGCGCTG AAGAAGCCGC TGAAGAGCGC ATTTTAGATG CCTTGTTGCC TAAGCCTAAG
GAAGATTGGG ACAGCGAAAA ATCAGATGGC AGCGCCACAC GTCAAATTTT CCGTAAGAAG
CTTCGTGAAG GTCAGCTAGA CGATAAAGAA ATTGAGATCG ATGTCTCTGC GCCACAGGCC
GGTATTGAAA TCATGTCTCC TCCTGGTATG GAAGAGATGA CTAACCAGTT GCAGAGCATG
TTCCAAAATA TGGGACCGGG TGCTAGTAAG CGCCGAAAAA TGCCAATCAA AGAAGCTTAT
AAGCTATTGA TTGAAGAAGA AGCATCTAAG CTGATTAATC AAGAAGACTT AAAAGAGCAG
GCGATCGAGC TTGTTGAGCA ACACGGCATC GTATTCCTCG ATGAGATCGA TAAGATCTGT
AAGCGTGGCG AATCGTCAGG CCCAGATGTG TCTCGTGAAG GTGTTCAGCG TGATCTACTG
CCTCTTGTTG AAGGTTGTAC GGTTAACACT AAACACGGCA TGGTAAAAAC CGACCACATC
TTGTTTATCG CCTCGGGGGC TTTCCAGATG TCTAAGCCAT CGGATCTGAT CCCTGAGCTT
CAAGGCCGTC TACCAATTCG TGTTGAATTA GATGCGTTAA CCGCTGGTGA CTTTAAGCGT
ATTCTGACTG AGCCTCATGC CTCGTTGACT GAGCAATATA TTGCTTTGAT GGGTACTGAA
GGCGTCACAA TCGAGTTTAC TGAAGATGGT ATCGACAGCA TTGCTGAAGC CGCTTGGCAA
GTGAACGAGC GCACTGAAAA CATCGGTGCC CGTCGTCTAC ACACTGTGAT GGAGCGCTTG
ATGGAAGAGC TTTCTTATGA AGCCTCTGAC AAGTCAGGTT CTGTTACCGT TATCGATGCG
GCTTATGTTA AGGCAAGCTT AGATAACTTG GTGCAAGACG AAGACTTAAG TCGCTATATT
CTTTAA
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| Protein sequence | MSEMTPREIV HELDSHIIGQ QKAKRSVAIA LRNRWRRMQL AADLRQEVTP KNILMIGPTG
VGKTEIARRL ARLAKAPFIK VEATKFTEVG YVGKEVEQII RDLTDSAIKL TREEQIKKCK
FRAEEAAEER ILDALLPKPK EDWDSEKSDG SATRQIFRKK LREGQLDDKE IEIDVSAPQA
GIEIMSPPGM EEMTNQLQSM FQNMGPGASK RRKMPIKEAY KLLIEEEASK LINQEDLKEQ
AIELVEQHGI VFLDEIDKIC KRGESSGPDV SREGVQRDLL PLVEGCTVNT KHGMVKTDHI
LFIASGAFQM SKPSDLIPEL QGRLPIRVEL DALTAGDFKR ILTEPHASLT EQYIALMGTE
GVTIEFTEDG IDSIAEAAWQ VNERTENIGA RRLHTVMERL MEELSYEASD KSGSVTVIDA
AYVKASLDNL VQDEDLSRYI L
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