Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3781 |
Symbol | |
ID | 5664166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4597245 |
End bp | 4597769 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238441 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_001503627 |
Protein GI | 157963593 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.171501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACAA TCGTATCAGT ACGCCGAAAT AACCAAGTTG TTATCGCCGG TGATGGCCAA GTTTCTCTCG GTAACACCGT TATGAAAGGC AATGCTAAAA AAGTTCGTCG CTTGTACCAC AACAAGGTAC TTGCGGGCTT TGCAGGCAGT ACAGCCGATG CATTCACCTT ATTTGAGCGT TTCGAAGCTA AGCTTGAAAT GCACCAAGGT CACCTAATGC GCGCCGCAGT TGAAATGGCT AAAGACTGGC GCTCAGATAA AGTTCTACGC AAACTAGAAG CCCTACTTGC CGTGGCCGAC GCTGAATCTT CATTAATCAT TACCGGCAAC GGCGATGTTG TTCAGCCTGA AAATGATCTT ATTGCGATTG GTTCCGGTGG CGCCTTTGCC CAATCAGCAG CTACTGCACT ACTTGAAAAC ACTGACTTAA GTGCATTAGA AATTGCTGAA AAATCGCTGA CAATTGCGGG TAATATTTGC GTATTTACCA ACCAATTTAA GACTATTGAA GAATTAAAGT ACTAA
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Protein sequence | MTTIVSVRRN NQVVIAGDGQ VSLGNTVMKG NAKKVRRLYH NKVLAGFAGS TADAFTLFER FEAKLEMHQG HLMRAAVEMA KDWRSDKVLR KLEALLAVAD AESSLIITGN GDVVQPENDL IAIGSGGAFA QSAATALLEN TDLSALEIAE KSLTIAGNIC VFTNQFKTIE ELKY
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