Gene Spea_3762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3762 
Symbol 
ID5664147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4575587 
End bp4576195 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID641238422 
Productmethylation site containing protein 
Protein accessionYP_001503608 
Protein GI157963574 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.62752e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC AGTATCAAAA AGGCTTTTCT CTTATAGAGT TGGTCATAGT TATCGTGATT 
TTAGGTCTGT TGGCTGCAAC AGCTATCCCA CGTTTCTTAA ACGTAACTGA TGATGCTGAA
GACGCCAGTG TAGACGGTGT CGCAGGCGGG CTAAGTACTG CAGTGAGCTT TGTGCGTTCA
CAGTGGGAAG TCGATGGTCG TCGAAATAAT ACCGTGTTAC TGGACGGAAC AACGGTAGCT
CTGGATACGC GTTTTGGTTA TCCAACGGGC CAGAGTAATA CAGATGCTAA AGGCATGAGC
CAAGACTCTT GCCAAGAAGT GTTCGATCTT GTTTTACAAA ATGCACCACG AAGCGTCGTT
TCAGGAGAAG ACGCGCGTAA AGCAAGATAT GTAGTGAGCG TGGCAAAAGG AGCGGGTGGC
AGTTCAAATA GCATAGATGG CGAGCTTGTT AGCGATCTTG ATGTTTGTTT ATATTACCTA
GCCTCATCAC TAGTGTTAAA TCCACAGGAC GGTAAACCGA CTGAGAATTT AACCGACTTA
AGTAACTTGG CGGGCAAAGG GGTGACCTAC AACCCAGGTT CAGGTCAAGT TGCTAGTTTT
ATTGACTAA
 
Protein sequence
MKQQYQKGFS LIELVIVIVI LGLLAATAIP RFLNVTDDAE DASVDGVAGG LSTAVSFVRS 
QWEVDGRRNN TVLLDGTTVA LDTRFGYPTG QSNTDAKGMS QDSCQEVFDL VLQNAPRSVV
SGEDARKARY VVSVAKGAGG SSNSIDGELV SDLDVCLYYL ASSLVLNPQD GKPTENLTDL
SNLAGKGVTY NPGSGQVASF ID