Gene Spea_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3761 
Symbol 
ID5664146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4574913 
End bp4575449 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID641238421 
ProductMSHA pilin protein MshA 
Protein accessionYP_001503607 
Protein GI157963573 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.02365e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA ATATGAATAT GAATATGCAA AAGCAAAATG GTTTTACCCT AATCGAATTA 
GTGGTTGTGA TTATTATTCT AGGTATTTTG GCTGTAACCG CAGCGCCTAA ATTCATCAAC
CTACAGAGCG ACGCACGTGC TTCTGCACTT CAAGGCGTTA AAGGCGCAAT CCAAGGCGCT
AACGGCCTAG TATTCGCCAA GACTGCTTTA GCAGGTGATG AGAAGAAAGA TAAAGATGAT
TGGACTGTAG GTAACATAAC ATCTGGAGTC GATATCGGTA CAGAAGCATA TGCACAACCT
CAATTTGGTT ACCTTCAAGC AACTGAAGTC GAATTCAACA ATGCTATCGA TGCCGATTTT
GGTACTGCAA CTAACAGTGA GTGGAAAGTA GCTGCAGGTA CTGCAGCAGG TACTCTCATT
ATCACTCAAA ATGGTGCTCC AGCTCCTGCA GACGGCAAAT CTTGCCAACT TGTTTACACA
GAAGCTGAAG ATGCTAACAC AGTACCTACA TACGAAATTA CTGACACTGG CTGTTAA
 
Protein sequence
MNMNMNMNMQ KQNGFTLIEL VVVIIILGIL AVTAAPKFIN LQSDARASAL QGVKGAIQGA 
NGLVFAKTAL AGDEKKDKDD WTVGNITSGV DIGTEAYAQP QFGYLQATEV EFNNAIDADF
GTATNSEWKV AAGTAAGTLI ITQNGAPAPA DGKSCQLVYT EAEDANTVPT YEITDTGC