Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3746 |
Symbol | |
ID | 5664131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4554355 |
End bp | 4555746 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238406 |
Product | outer membrane efflux protein |
Protein accession | YP_001503592 |
Protein GI | 157963558 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.622366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT CGTTGTGTGC TCTTTTGCTA GTCTTGCCGT TAACAGCCCA GGCTAAAACC ATGGCCTTCG ATCAGGCTTG GCAGCAGCTG GTTAATGTCA GTGATAAATT GCAAGCGGGG GCTCAAGAGG TCAATCGCGC AGCGGCCGAA CGAGATGCGG GTGAGGATAT GAACCTGCCC TCAATTAACC TCACTGGTAG CTATACACGT TTAGAAAAGC CGATAGAATT AGATCTGCGG GATCTTAATC CGCTTGCCTC CCTCGATCCT GCTAGCTTAC CGCCAGCCCT CGGTGGCGCC CTCGCCGGGA TCCCGGGTTC AATGTTTGTC ACTCCCTTTA CCGAGCAAGA TATCTTTCGC TCAAGCCTAC AGGCTATGTG GCCTATTTAC ACAGGTGGTA AAATTTCTGC AGCCCAAGGG ATCCACGAGG CCCATGTTGC CGAGAAAGAG CAAGAGCTTA AGCTAACAAG CCGCGATCTA TTTGTGCAGT TGGTTGACAG ATATTATGCC GTGGCAGTGA CTGAGGCGCT AACACAAACC CAATCTGAGC TGGTGGACTC GCTCACGTTA CACGCATCTC AAGCCGAAAA GCTGGAACAG CAAGGTCAAA TAGCCAAGGT TGAGCGACTC AACGCTCAAG TCGCACTGGA AAATGCCCGC GTCAGTTATG GCAGTGCTAA ACGCCAGTCT GAAATGGCGA TGATCGCTCT GTCTAGAATG CTGCATGAGC GAGAGGTCGA TACCACTTCG CCGTTATTTA TGTTGCATAG TGCGCCTTCA TTACCGCAAT TGACGCAACT CACTCTTAAT CAACATCCTG CATTGAAGTT GCTCGAGGCT AAAGAAGCGC AGGCTCAAGG CTTGGTTGAT GTCGAGAAAG GCAGCTATTT ACCGACGGTT TTTCTATACG GTAATTACAC CCTCTATGAA GATGACAGCC TATTTTCCCA GATGGAACCG GACTGGATGT TAGGAGTGGG AGTTACTGTG CCACTACTGA GCCGTGATGG GCGTGGTGGT AAGGTGGAAG CGGCAAAGAG CGCGTTGTTG CAGGCTAGAT ATACTAAGGC GCAGACCCAA CAAGATCTGA GCTTATTGTT GGATCAGAGT TATCGCCAGC TGTTGCAGGC GCAAGAAGAG GTGGTGTCGC TAAACACATC CATGAGCCTA GCCCTAGAGA ATAAGCGACT TCGAGATATC GCCTTTAAGC AGGGCCTGTC GACCTCAATC GAAAAGGTGG ATGCAGAGCT TAAGCTTAAC GCGGTCGCCA CCCGGCAGCT TGGGGCGCAA TATCGATATG TACAAGCATA CGCAAGACTG ATGGCAATAA GCGGTCAGCT TGATGAATTT ATAGGTAGAA GTATTAAGCA AGGGGACACC AATGCGTACT AA
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Protein sequence | MKRSLCALLL VLPLTAQAKT MAFDQAWQQL VNVSDKLQAG AQEVNRAAAE RDAGEDMNLP SINLTGSYTR LEKPIELDLR DLNPLASLDP ASLPPALGGA LAGIPGSMFV TPFTEQDIFR SSLQAMWPIY TGGKISAAQG IHEAHVAEKE QELKLTSRDL FVQLVDRYYA VAVTEALTQT QSELVDSLTL HASQAEKLEQ QGQIAKVERL NAQVALENAR VSYGSAKRQS EMAMIALSRM LHEREVDTTS PLFMLHSAPS LPQLTQLTLN QHPALKLLEA KEAQAQGLVD VEKGSYLPTV FLYGNYTLYE DDSLFSQMEP DWMLGVGVTV PLLSRDGRGG KVEAAKSALL QARYTKAQTQ QDLSLLLDQS YRQLLQAQEE VVSLNTSMSL ALENKRLRDI AFKQGLSTSI EKVDAELKLN AVATRQLGAQ YRYVQAYARL MAISGQLDEF IGRSIKQGDT NAY
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