| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3745 |
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| Symbol | |
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| ID | 5664130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4553394 |
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| End bp | 4554365 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238405 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001503591 |
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| Protein GI | 157963557 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACTA ATCGCATCTT GGCAGCAGTG GCATTCATCG TTTTAATTGG CGCTTTGGTA
TATGGATTAA TCTTGGCTTA TTCACCTAAG CCACAATTGC TGCAGGGGCA GATCGAGGCG
CGTGAGTACA ACATCTCCTC AAAAGTTCCT GGTCGAGTCG AAGAGGTTTT GGTTCGTCGC
GGCGACAAGG TTAATGAAGG CGATCTGCTA TATGCCATCT ATAGCCCAGA ACTTAAAGCT
AAATTGATGC AGGCAGAAGG CGGCCGTGAT GCGGCGCTGG CAATGCAGCA GGAAGCGGAT
AATGGTGCAC GTAAGCAGCA GATAGCCGCC TCTAAAGAGC AATGGTTAAA AGCGCAGGCG
GCGGCTAAGT TAGCACGCAC CACCTTCGAT CGCGTCGAAG TGCTATTTAA TGAAGGCGTG
CTAGCAAGAC AGAAGCGTGA TGAAGCCTTT ACTCAGTGGC AAGCGGCTAA GTATACCGAG
CAAGCTGCAC TGGCCATGTA TCAGATGGCA GATGAAGGCG CACGAGTGGA AACCAAGGCT
GCAGCCGCCG GAAATGCGCG TATGGCCGAA GGTGCCGTTA ACGAAGTCTC TGCCATTCTT
GCCGATAGTC AAATGCGCTC ACCTAAAACT GGTGAGATCA GCGAGGTACT GCTGCAGGCT
GGCGAATTAG CACCAAGTGG CTTCCCGGTA GTCAGCTTAA TCGATATGAA TGATGCTTGG
GCGGTATTCC AAGTGCGCGA GGATCAGCTT AAAAAGTTCA AGCAAGGCGA TGTACTTAAG
TTGACTATCC CTGCACTCGA GCGAGAAGTG GAGTTCACTG TGAGTCATAT TGGCGTCATG
GGTGAGTTTG CCACCTGGCG TGCCACAGAG AGCGGTCATG ACTTCGATAT GCGTACCTTC
GAAGTTGAGC TGCGTCCCAA TGAGACGATC AAAGATCTAA GAGTCGGCAT GTCGATACTG
TTCACCCTTT AG
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| Protein sequence | MRTNRILAAV AFIVLIGALV YGLILAYSPK PQLLQGQIEA REYNISSKVP GRVEEVLVRR
GDKVNEGDLL YAIYSPELKA KLMQAEGGRD AALAMQQEAD NGARKQQIAA SKEQWLKAQA
AAKLARTTFD RVEVLFNEGV LARQKRDEAF TQWQAAKYTE QAALAMYQMA DEGARVETKA
AAAGNARMAE GAVNEVSAIL ADSQMRSPKT GEISEVLLQA GELAPSGFPV VSLIDMNDAW
AVFQVREDQL KKFKQGDVLK LTIPALEREV EFTVSHIGVM GEFATWRATE SGHDFDMRTF
EVELRPNETI KDLRVGMSIL FTL
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