Gene Spea_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3714 
Symbol 
ID5664099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4519808 
End bp4520599 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content50% 
IMG OID641238374 
ProductABC-3 protein 
Protein accessionYP_001503560 
Protein GI157963526 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0390511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATC TCGATCTACT CTCTATCTTG CTGCCTGCTT TCGTAGCGGG GATCTTGGTG 
TTATCCACTC ATGTTGTCTT AGGGCAACAG GTTTTAAAGC GAGGCATTAT CTTTATCGAT
CTGGCGATTG CTCAGGTCGC CGCACTAGGT GCGATCGTCG GCCACTTAAA TCACGACATA
GAAGCCCTGC CATTTTCCAA TGTGTGGATG CCTGCGCTAT TTGCTATCGC GGGAGCTGCT
TTCATCGCTT GGCTGTCTAA GCGGATGGCT GATGAATTGG AAGCGATAAT CGGTTGTTTC
TATGTGCTTG CAGCCGTGGC TGCCATGTTG CTGCTGTCTA ACGACCCCCA TGGCGCAGAG
ATGCTCAAGC AGCTGATGTC TGGCCAGATC TTATGGGTAA GCTGGGGTCA GTTAATTCTG
CCAGCCTGTA TCTACTCGGC GATATTACTA GCGCTGATTT ATCGCCCCTC CTTACTCGAG
GGCCGAGCTT TTTACCTGCT CTTCGCAGTG GTGATCACTC TGTCTGTCGA ATTAGTCGGT
GTATATCTGG TGTTTAGTAG CTTGATCTTG CCTGCGCTCG CGGTGAATCA CTTCAGTGGA
CGTTTTAAGC TGGGCTGGGC CTATTTAGTC GGCTTAGTGG GGTATGTCGC GGGGTTAGTC
TTGTCTGCGA GTCTAGATCT TCCAAGCGGC GCAGCCATAG TGGCAACCTT AGCGGTGACG
GCAATACTAT TTAGATTGAT GCTGCATCTG AAAGCCAGAT ACTCGGCTTT GGAAAATGAA
TTGAGGAACT AG
 
Protein sequence
MFDLDLLSIL LPAFVAGILV LSTHVVLGQQ VLKRGIIFID LAIAQVAALG AIVGHLNHDI 
EALPFSNVWM PALFAIAGAA FIAWLSKRMA DELEAIIGCF YVLAAVAAML LLSNDPHGAE
MLKQLMSGQI LWVSWGQLIL PACIYSAILL ALIYRPSLLE GRAFYLLFAV VITLSVELVG
VYLVFSSLIL PALAVNHFSG RFKLGWAYLV GLVGYVAGLV LSASLDLPSG AAIVATLAVT
AILFRLMLHL KARYSALENE LRN