Gene Spea_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3618 
Symbol 
ID5664004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4408922 
End bp4409365 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content45% 
IMG OID641238280 
ProductPTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001503466 
Protein GI157963432 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000880697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAA GTACCATCCT GCAGCCGGAA TGCACTACCT GTGCCACTCC GGGCAGTAAG 
AAAAAGGTAT TGGAGTTAAT CAGTGATATT GCCGCTGTCC AGTACCCTAC CCTTTCTTCA
CAAGAAATTT TTGAAAGTCT CTTGGCGAGA GAAAAAATGG GTAGCACGGG TATAGGTAAC
GGTATAGCGA TTCCTCACGG AAGGCTGACA AATATAGAGC GCCCTGTTGC GGTTTTAGTT
AAGTGTGAAG ATCCAATCGC ATTCGACGCT ATCGATAAAC AACCTGTCGA CATTCTATTT
GCGCTATTGG TGCCTTCCGA GCAGTGTGAG CAGCATTTAG CAACACTGTC TCTAATGGCT
GAAAAACTCA ACGATAAGGC GGTAGTCAAA CAGTTGAGAA AAACCAGTAA TGAGTCAGAA
CTATACCAAG TCATTACCCA GTAA
 
Protein sequence
MELSTILQPE CTTCATPGSK KKVLELISDI AAVQYPTLSS QEIFESLLAR EKMGSTGIGN 
GIAIPHGRLT NIERPVAVLV KCEDPIAFDA IDKQPVDILF ALLVPSEQCE QHLATLSLMA
EKLNDKAVVK QLRKTSNESE LYQVITQ