Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3618 |
Symbol | |
ID | 5664004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4408922 |
End bp | 4409365 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238280 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_001503466 |
Protein GI | 157963432 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000880697 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTAA GTACCATCCT GCAGCCGGAA TGCACTACCT GTGCCACTCC GGGCAGTAAG AAAAAGGTAT TGGAGTTAAT CAGTGATATT GCCGCTGTCC AGTACCCTAC CCTTTCTTCA CAAGAAATTT TTGAAAGTCT CTTGGCGAGA GAAAAAATGG GTAGCACGGG TATAGGTAAC GGTATAGCGA TTCCTCACGG AAGGCTGACA AATATAGAGC GCCCTGTTGC GGTTTTAGTT AAGTGTGAAG ATCCAATCGC ATTCGACGCT ATCGATAAAC AACCTGTCGA CATTCTATTT GCGCTATTGG TGCCTTCCGA GCAGTGTGAG CAGCATTTAG CAACACTGTC TCTAATGGCT GAAAAACTCA ACGATAAGGC GGTAGTCAAA CAGTTGAGAA AAACCAGTAA TGAGTCAGAA CTATACCAAG TCATTACCCA GTAA
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Protein sequence | MELSTILQPE CTTCATPGSK KKVLELISDI AAVQYPTLSS QEIFESLLAR EKMGSTGIGN GIAIPHGRLT NIERPVAVLV KCEDPIAFDA IDKQPVDILF ALLVPSEQCE QHLATLSLMA EKLNDKAVVK QLRKTSNESE LYQVITQ
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