| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3598 |
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| Symbol | |
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| ID | 5663984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4390475 |
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| End bp | 4391830 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238260 |
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| Product | protease Do |
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| Protein accession | YP_001503446 |
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| Protein GI | 157963412 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.133395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTA AATTATCCTT ACTTTCAGCT GCGATATTGA GCGCAACCCT GACACTAGCC
CCTGTTGCTT CTCAAGCTGC AATTCCTTTA GCCGTCGACG GACAAGAGCT ACCAAGCTTA
GCGCCCATGC TGCAAGAAAC AACGCCAGCC GTAGTAGCAG TTGCAGTCTC TGGAACCCAT
GTTTCTAAAC AGAAGGTCCC CGATGCTTTC CGTTATTTCT TCGGCCCTAA CGCTCCACGT
GAACAAGTGC AAGAACGTCC ATTTAAAGGG CTAGGTTCAG GGGTCATTAT CGATGCCAAA
GAAGGTTATA TCGTCACTAA CAACCATGTG ATTGAAGGTG CCGATGAGAT CCTTATCGGG
CTACATGACG GCCGAGAAGT CGAAGCGAAA CTAATTGGCA CTGACGCAGA GTCTGATATC
GCTTTATTGC AGATAAAAGC CAAGAATCTG ACCGCATTGA AACGCGCCGA CTCAGATAAA
CTCCAAGTCG GTGACTTTGC TGTAGCCATT GGAAATCCAT TCGGTCTAGG TCAAACAGTT
ACTTCAGGAA TAGTCAGTGC CATGGGCCGA AGCGGTCTTG GCATCGAGAT GCTAGAAAAC
TTTATTCAAA CCGATGCCGC AATCAATAGC GGTAATTCCG GTGGCGCCTT GGTTAACCTC
AATGGTGAGC TTATCGGTAT CAATACCGCG ATTGTAGCTC CTGGTGGCGG CAACGTCGGT
ATTGGTTTCG CTATCCCTGC CAATATGGTT AATAACCTCG TTAAGCAGAT TATTGAACAC
GGTGAGGTTC GCCGCGGCGT GCTTGGCGTG ATGGGACAAG ATCTCACCAG TGAACTCGCC
AAAGGTTTCG GTATCGAAAC TCAGCACGGC GGCTTTATCA ACGAAGTGAT GCCTGACAGC
GCCGCTGCCA AAGCGGGTAT AAAAGTCGGT GATATTATTG TCAGCGTTAA TGGACGCAGC
ATTAAGAGCT TCCAAGAGCT ACGTGCAAAA GTCGCGACTA TGGGCGCGGG CACTAAAGTG
GAATTTGGTT TAATCCGCGA TGGCGATGAA GAAACGGTTA CCGCAGTACT CGGCGAGTCA
ACTCAGGCGG CAGAAGCCGC TGCGGGCGCA GTGCATCCTA TGCTACAAGG GGCGAAGCTG
GAAACGGCAA GTTCGTCTGG AGTTGAGATC ACAGATGTAG CTCAAGGCTC TCCAGCTGCA
GCAAGTGGCT TAATAAAAGG TGATATTATC GTTGGTGTTA ACCGCACTAA GGTGAAAAAC
CTCAAAGCCC TTAAATCTGC GCTTGAAGAT CAAAAAGGCT CAGTGGCGCT AAAAATTAAG
CGAGATAACA CTAGCTTGTA TTTGATCCTG AGGTAA
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| Protein sequence | MKTKLSLLSA AILSATLTLA PVASQAAIPL AVDGQELPSL APMLQETTPA VVAVAVSGTH
VSKQKVPDAF RYFFGPNAPR EQVQERPFKG LGSGVIIDAK EGYIVTNNHV IEGADEILIG
LHDGREVEAK LIGTDAESDI ALLQIKAKNL TALKRADSDK LQVGDFAVAI GNPFGLGQTV
TSGIVSAMGR SGLGIEMLEN FIQTDAAINS GNSGGALVNL NGELIGINTA IVAPGGGNVG
IGFAIPANMV NNLVKQIIEH GEVRRGVLGV MGQDLTSELA KGFGIETQHG GFINEVMPDS
AAAKAGIKVG DIIVSVNGRS IKSFQELRAK VATMGAGTKV EFGLIRDGDE ETVTAVLGES
TQAAEAAAGA VHPMLQGAKL ETASSSGVEI TDVAQGSPAA ASGLIKGDII VGVNRTKVKN
LKALKSALED QKGSVALKIK RDNTSLYLIL R
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