Gene Spea_3595 details

Gene Information

• Locus tag: Spea_3595
• Symbol: rplM
• ID: 5663981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 4387695
• End bp: 4388126
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641238257
• Product: 50S ribosomal protein L13
• Protein accession: YP_001503443
• Protein GI: 157963409
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000249881
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACTA CTTTTACTGC TACACCAGAA ACAGTCACTC GTGATTGGTT CGTCGTTGAC 
GCCGAAGGTA AAACTTTGGG TCGTATCTCT ACTGAAATCG CTACTCGCCT ACGCGGTAAG 
CACAAGCCAG AGTATACGCC TCATGTAGAT ACTGGTGACT ACATCATCGT TATTAACGCT 
GATAAAGTTG CTGTGACTGG TAACAAAGCT AAAGGCAAAG TTTACTACTC ACATTCAGGT 
TTCATCGGTG GCATTAAGCA GATCACTTTT GAGAAGCTAC AAGCTCATAA GCCTGAAATG 
ATTATCGAAA AGGCTGTTAA GGGTATGCTA CCTAAAGGTC CATTGGGCCG TGCCATGTTC 
CGTAAGCTTA AAGTTTACGC TGGTACAGAG CATAACCACG CTGCACAACA ACCTCAAGTT 
CTTGATATCT AA 

 

Protein sequence

MKTTFTATPE TVTRDWFVVD AEGKTLGRIS TEIATRLRGK HKPEYTPHVD TGDYIIVINA 
DKVAVTGNKA KGKVYYSHSG FIGGIKQITF EKLQAHKPEM IIEKAVKGML PKGPLGRAMF 
RKLKVYAGTE HNHAAQQPQV LDI