Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3591 |
Symbol | |
ID | 5663977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4384665 |
End bp | 4385288 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641238253 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001503439 |
Protein GI | 157963405 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000355002 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGTT ATGTATTGAT TACAATCTTG TCTATATTGT CTCTACCAAG TTTTGCGACT ATCAAGGCTA TTGATGTCTA TACTCAGGAG CAACTGGTTG ATCTAATTCG AACTAAACGC TATTTAACAC AAGTTAAAGG TGATGACTGC CAGATAGTAC AGGATATTGA AGCAAGGGCT GAGGTACTAA AGCAGCCTTT GTATCAGTAT CTTTGGGCGG AAATGCTCAA TTATGGCATC TGCGTAAAGG CGAATCCGCC GCGCGGGATT GCTATGTTAA AAACCTCTGC TGAGCAGGGG AGTGCTGAAG CCATGGTAAG AATGGCTGAG TATTATCACG ATGGTAAATT TGTCATCGAA GATAAACAAC GCGCTGTGCA ATATACATTG CCAGCTGCCG CGACAGGCGA TCTGCCTGCG CGAATGATGT TGGTTCGGTT ATTTGGTGAG GGCTATGGTA GTCCTCGAGA TTACGAAGTG GGTTTTCATT GGCTATATAA CGAAGTGTTT AGCGATGAGA CCACGCAAGC CGAAGCAATT AATTTGTTAA AGGTGTTAGA GGCAAAAATG CCGCCCAGCG CAGTTGCTAG GGCAAAGAAA GAGCACCTTA GAACGCAACA ATAA
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Protein sequence | MLRYVLITIL SILSLPSFAT IKAIDVYTQE QLVDLIRTKR YLTQVKGDDC QIVQDIEARA EVLKQPLYQY LWAEMLNYGI CVKANPPRGI AMLKTSAEQG SAEAMVRMAE YYHDGKFVIE DKQRAVQYTL PAAATGDLPA RMMLVRLFGE GYGSPRDYEV GFHWLYNEVF SDETTQAEAI NLLKVLEAKM PPSAVARAKK EHLRTQQ
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