Gene Spea_3591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3591 
Symbol 
ID5663977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4384665 
End bp4385288 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID641238253 
ProductSel1 domain-containing protein 
Protein accessionYP_001503439 
Protein GI157963405 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.55002e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGTT ATGTATTGAT TACAATCTTG TCTATATTGT CTCTACCAAG TTTTGCGACT 
ATCAAGGCTA TTGATGTCTA TACTCAGGAG CAACTGGTTG ATCTAATTCG AACTAAACGC
TATTTAACAC AAGTTAAAGG TGATGACTGC CAGATAGTAC AGGATATTGA AGCAAGGGCT
GAGGTACTAA AGCAGCCTTT GTATCAGTAT CTTTGGGCGG AAATGCTCAA TTATGGCATC
TGCGTAAAGG CGAATCCGCC GCGCGGGATT GCTATGTTAA AAACCTCTGC TGAGCAGGGG
AGTGCTGAAG CCATGGTAAG AATGGCTGAG TATTATCACG ATGGTAAATT TGTCATCGAA
GATAAACAAC GCGCTGTGCA ATATACATTG CCAGCTGCCG CGACAGGCGA TCTGCCTGCG
CGAATGATGT TGGTTCGGTT ATTTGGTGAG GGCTATGGTA GTCCTCGAGA TTACGAAGTG
GGTTTTCATT GGCTATATAA CGAAGTGTTT AGCGATGAGA CCACGCAAGC CGAAGCAATT
AATTTGTTAA AGGTGTTAGA GGCAAAAATG CCGCCCAGCG CAGTTGCTAG GGCAAAGAAA
GAGCACCTTA GAACGCAACA ATAA
 
Protein sequence
MLRYVLITIL SILSLPSFAT IKAIDVYTQE QLVDLIRTKR YLTQVKGDDC QIVQDIEARA 
EVLKQPLYQY LWAEMLNYGI CVKANPPRGI AMLKTSAEQG SAEAMVRMAE YYHDGKFVIE
DKQRAVQYTL PAAATGDLPA RMMLVRLFGE GYGSPRDYEV GFHWLYNEVF SDETTQAEAI
NLLKVLEAKM PPSAVARAKK EHLRTQQ