| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3547 |
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| Symbol | |
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| ID | 5664829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4332460 |
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| End bp | 4333005 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641238209 |
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| Product | oligoribonuclease |
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| Protein accession | YP_001503395 |
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| Protein GI | 157963361 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.941773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTATAG ATGAAAACAA TCTGATTTGG GTCGATTTGG AAATGACAGG GCTTGAGCCT
GACGTTGACA GAATTATTGA AATTGCCACG ATAGTGACAG ATAAAGAGCT CAATATTATT
GCGCAAGGGC CTGTTTTTGC TATCCATCAA TCCGATGAGC AGCTTGCTCT AATGGATGAT
TGGAACCAGA AACATCACGG TCAGTCGGGT CTAGTTGATC GCGTGAGAGC GAGTACGATA
AATGAAGAAC AAGCAATTGC CGAGACTATT GCGTTCTTGT CGCAATATGT GCCAGCGGGT
GCTTCACCTA TGTGTGGTAA TAGTATTGGC CAAGATCGTC GTTTTCTAAA CCGTTATATG
CCAGAGCTAG AGGGTTATTT CCATTACCGC AATATAGATG TGAGCACTAT TAAAGAGTTG
GTCCGTCGTT GGGAGCCATC TGCGATGGAG GGCTTTAGCA AGAAGAACAC CCACCAAGCT
TTGCAAGATA TTGAAGAATC TATCGCCGAA TTGCAGTTTT ATCGAGCTAA AGTATTTACT
ATTTAA
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| Protein sequence | MAIDENNLIW VDLEMTGLEP DVDRIIEIAT IVTDKELNII AQGPVFAIHQ SDEQLALMDD
WNQKHHGQSG LVDRVRASTI NEEQAIAETI AFLSQYVPAG ASPMCGNSIG QDRRFLNRYM
PELEGYFHYR NIDVSTIKEL VRRWEPSAME GFSKKNTHQA LQDIEESIAE LQFYRAKVFT
I
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