Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3538 |
Symbol | |
ID | 5663924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4321121 |
End bp | 4322272 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238194 |
Product | HflK protein |
Protein accession | YP_001503386 |
Protein GI | 157963352 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0107822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGGA ACGAGCCCGG TAACAAGGGT CAAGACCCTT GGGGAAATGG CAATAAAGGT GGTAATGATA AAGGACCACC AGATTTAGAT GAAGTTTTTC GTAACCTTTC TAAGCGCTTC GGTGGCAAGG GTAATGGTTC TGGAGGCAGC ATTAGTGCGG CCAGCTTAAT CATTGTTCTA GTTATCGCAA TAGTTGTATG GGGACTTTCA GGTTTCTATA CGGTTAAAGA AGCTGAGAAA GGTGTTGCTC TTCGTTTTGG CGAATATATC GGGGAAGTCG ATCCAGGCCT TCAATGGAAA GCCACTTTTA TTGATGAAGT GACGCCTGTA AACGTACAAA CGGTTCGTTC TATTCCAGCT TCTGGAAGTA TGCTAACAGC CGACGAAAAC GTTGTCCTTG TTCAACTAGA TGTGCAGTAT CGAGTGAGTA ACGCGAAAGA TTACCTCTAT AGCGTAGTCG ATGCAGATGC GAGTTTGCGT GAGGCGACAG ATAGCGCGCT ACGTTACGTT ATCGGCCATA ACACTATGGA TGATATCTTG ACTACTGGTC GTGATAAAAT TCGTCGTGAC ACATGGGACG AAATCGAGCG AATTATCAAA CCGTATAAAC TCGGTATTTC AGTTGTTGAT GTGAACTTCT TGCCAGCTCG TCCACCAGAA GAGGTGAAAG ATGCCTTCGA TGATGCGATT GCAGCACAAG AGGATGAGCA ACGTTTCATT CGTGAAGCTG AAGCTTACTC ACGTCAGTTA GAGCCAAAGG TTCGTGGTAC TGTACAGCGC ATGGATCAAC AAGCGATTGC TTATAAGCAG CGAGTGATTT TAGAAGCGAA AGGTAAAGTA GCTCGTTTCG AACAGTTACT GCCTGAGTAT CAAGCGGCGC CAGAAGTGAC TCGCGAACGT ATGTACTTTG ATACGATGCA GGAAGTTATG AGTGGCACCA ATAAAGTTCT TATCGATGCC AAGAATAGTG GTAACTTGAT GTATTTACCA TTAGACAAGT TGATGCAGAA TAGCCAGTCG CATAAGTCTG CCAGCACTAA TACTAAACCG GCAAAGCCTG CGATGTCAGT TAATAGTACA ACTCACACTA ACAGCAGCAT TCCTCTCGAT GGTCGCCCAT CTAGAGGTGA ACGTTCGTTG GGGAGGAACT AA
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Protein sequence | MAWNEPGNKG QDPWGNGNKG GNDKGPPDLD EVFRNLSKRF GGKGNGSGGS ISAASLIIVL VIAIVVWGLS GFYTVKEAEK GVALRFGEYI GEVDPGLQWK ATFIDEVTPV NVQTVRSIPA SGSMLTADEN VVLVQLDVQY RVSNAKDYLY SVVDADASLR EATDSALRYV IGHNTMDDIL TTGRDKIRRD TWDEIERIIK PYKLGISVVD VNFLPARPPE EVKDAFDDAI AAQEDEQRFI REAEAYSRQL EPKVRGTVQR MDQQAIAYKQ RVILEAKGKV ARFEQLLPEY QAAPEVTRER MYFDTMQEVM SGTNKVLIDA KNSGNLMYLP LDKLMQNSQS HKSASTNTKP AKPAMSVNST THTNSSIPLD GRPSRGERSL GRN
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