Gene Spea_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3536 
Symbol 
ID5663922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4319238 
End bp4319879 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID641238192 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_001503384 
Protein GI157963350 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.21073e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA TAGATAAAAC AAAAATTCCA ACACTCTCTG GAGACAAGTG GATGAGCAAT 
GCGCCAGTCG ATACCGGACG TCGCAGATTT CTGACCGCAG CCACCGCCGT AGTTGGTGGT
GCTGGTGCCG CTGCTGTAGC GGTTCCGTTT ATAAAGTCAT GGAATCCGAG TGCCAAAGCG
AAAGCTGCAG GTGCGCCGGT TGAAGTAAAC ATAAGTAAAG TAGAGCCAGG TCAACTTATT
CGAGTTGAAT GGCGTGGTAA ACCTGTATGG GTTGTTCGTC GCACGCAGGA GATCTTGGAT
GGTCTACCAG CAATTGATGC ACAGCTTCGC GATCCTGATT CAGTTGAGCC GCAGCAACCT
GCATATGCGC AGAACCCTGG GCGTTCAATT AAAGCTGAGT ACTTCATTGC CGTTGGCTTA
TGTACTCACT TGGGTTGTTC TCCAACTTAC TTACCAGACA CATTTGGTGA ACAAGTTGAA
GGTGTTGCGT CAGGATTCTT CTGCCCATGT CACGGCTCAA AGTTTGATAT GGCTGGTCGC
GTATTCCAAG GTGTACCTGC GCCGTTAAAC CTAGTCATCC CTCCACATCA ATATCTTGAT
GATAGCACCG TGCTTATCGG TGTTGATAAA GGAGCTGCGT AA
 
Protein sequence
MKKIDKTKIP TLSGDKWMSN APVDTGRRRF LTAATAVVGG AGAAAVAVPF IKSWNPSAKA 
KAAGAPVEVN ISKVEPGQLI RVEWRGKPVW VVRRTQEILD GLPAIDAQLR DPDSVEPQQP
AYAQNPGRSI KAEYFIAVGL CTHLGCSPTY LPDTFGEQVE GVASGFFCPC HGSKFDMAGR
VFQGVPAPLN LVIPPHQYLD DSTVLIGVDK GAA