Gene Spea_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3509 
Symbol 
ID5663895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4289106 
End bp4289741 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content42% 
IMG OID641238165 
ProductcAMP-regulatory protein 
Protein accessionYP_001503357 
Protein GI157963323 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.47338e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTGA TTGGAAAGCC AAAACCAGAT CCAACTTTGG AATGGTTTTT ATCACACTGT 
CACATTCATA AATATCCAGC CAAAAGTACT TTGATCCACG CTGGTGAAGA TTCAGATACA
CTTTACTACA TAGTAAAAGG CTCTGTTGCT GTCTTGATTA AAGACGAAGA AGGTAAAGAG
ATGATTCTTT CTTACCTTAA CCAAGGCGAC TTTATCGGTG AGCTAGGTTT ATTTGAAGAG
CAAGCAGAAC GTACTGCATG GGTTCGTGCT AAGCAAGCTT GTGAAATTGC TGAAATCTCT
TACAAGAAGT TCAAGCAGCT AATTCAGGTT AACCCAGAAA TCTTGATGAA GCTTTCATCA
CAGATGGCTT ACCGCCTACA CAGCACAAGC CAGAAAGTAG GTGATCTTGC TTTCCTTGAC
GTTGCTGGAA GAATTGCACA AACATTGCTT CACCTTGCAA AGCAGCCAGA TGCAATGACG
CATCCAGATG GCATGCAGAT CAAGATCACT CGTCAAGAGA TTGGCCAAAT CGTTGGTTGT
TCTCGTGAGA CAGTAGGTCG TATCTTGAAA ATGCTTGAAG AACAAAACCT TATCCAAGCG
CATGGCAAAA CTATTGTGGT TTACGGAACA CGATAA
 
Protein sequence
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE 
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFKQLIQV NPEILMKLSS
QMAYRLHSTS QKVGDLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R