Gene Spea_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3501 
Symbol 
ID5663887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4279723 
End bp4281693 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content48% 
IMG OID641238157 
ProductABC transporter related 
Protein accessionYP_001503349 
Protein GI157963315 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTAT GCCTTCTAGG CTATTATCCC TGCCAATATT TACTGTGTAA GCCGACTTCA 
ATGATCACCA TCTCTCAAGC TCAACTCGTT CGTGGCTCGA AAACCTTGCT CGATGAAACT
TCATTAACCG TCTATCCAGG CCACAAGGTC GGTCTCGTTG GAGCAAACGG CAGCGGCAAG
TCTTCATTGC TTGCGCTTAT CTTGGGCAAA ATCAGCCTAG ATAAAGGTGA ATTTACTATG
CCTAGCGGTT GGCAGATGGC CACTGTGGCA CAGGAAACAC CTGCACTTGA CGTATCGGCA
ATTGAATATG TGATCGATGG CGATAGCGAA TACCGCGAAC TTGAAGCCGA GTTACATGCA
GCCCAAGAAG CCGACGATGG TCATAAGATT GCCCTATTGC ATGGCAAAAT TGATGCTATT
GGCGGCTATG CCATTCATTC TCGCGCCGCA AGCTTACTTG CCGGCCTAGG TTTTAGCGAG
CAAGAGCAAA GCAATCCAGT GAAGAGTTTC TCGGGTGGTT GGCGCATGCG TCTTAACTTA
GCCCAAGCTC TGTTATGTCG CTCAGATCTA CTACTTCTCG ATGAGCCAAC TAACCACTTG
GACTTAGACA CCATGTACTG GTTAGAGGGC TGGATTAAAG CCTATCAAGG CACGCTTATT
CTGATCAGTC ACGACCGCGA CTTTATCGAT GGTATCGTCG ATGAAATCGT TCATGTCGAA
AACACAAAAC TGAACTACTA CAAGGGTAAC TACACCTCGT TTGAGCGTGT TCGTGCCGAG
CGTATGGCGC AGCAACAAGT CGCCTTTGAG CGTCAACAAA AAGAGCGCGC CCATATGCAA
TCTTTTGTTG ACCGTTTCCG CTATAAAGCC AGTAAAGCCA AGCAGGCTCA AAGTCGCTTA
AAAGCGCTTG AGCGTATGGC TGAGCTACTG CCATCACAAG CCGACAGCCC ATTCCATATG
GCATTTAGAG AACCTGAAGC CTTGCCAAAT CCACTGGTGA CAATGGAGCA GGTTTCTATC
GGTTACGGTG AAACCGAAAT CCTTAAGAAA GTTCATCTCA ACCTAGTTCC CGGTGCTCGT
ATCGGTTTGC TAGGTCGCAA TGGTGCGGGT AAGTCGACCT TAGTAAAACT GCTCTCTGGC
GAGCTCTCGC CGATGAAAGG TCAGTATGAA ACAAATCCGG GCTTAAACAT CGGATATTTT
GCTCAGCATC AGCTGGAATT TTTAAGCTTA GATGACTCAC CGCTGCAGCA TATGGTGCGC
CTAGCCCCAA CAACTAAAGA GCAGGAACTA CGTAACTTCT TAGGCGGTTA CGGTTTTAAC
GGCGATATGG CATTGTCACC GGTTCGCCCC TTCTCTGGTG GTGAAAAGGC ACGTTTAGTA
CTGGCATTGC TTGTATGGCA ACGCCCAAAC CTATTGCTAC TCGATGAACC AACTAACCAC
TTAGATCTAG AGATGCGTCA TGCGTTAACC ATGGCTCTAC AGACCTTTGA AGGTGCAATG
ATTATCGTCT CGCACGATAG ACATCTATTG CGCTTAAGCT GCAGTGATTA CTATCTCGTC
GACCAGGGGG AAGTAAAAAG CTTCGACGGC GACCTAGATG ATTATCATCA GTGGTTGCTC
GATGCAGCTA AGACCGCTGG CAAGTCGGAA GAGACTGAGA CTGGCAAGCC AGTTCAAGAC
AAGAAGCTAC AGAAACGCTT GGATGCAGAG CTAAGACAGA AGCTGTCACC ACTTAAGAAG
GTGCAGACTA AACTTGAAAA AGAACAGCAT AAAGCTAACG AGCGCCTAAA AGAGCTTGAA
GATATGCTGG CCGATACTAG CCTTTATGAT GCCGATAACA AGGCTAAACT CACCCAAGTA
CTCACTGAGC GTACAACGCT GACTCAAGGG TTAGAGGAGA GTGAAATGGA GTGGCTAGAA
ATCCAAGAAG AGATCGAAAC CATAGAGCAA AGCGTTCGCG CCGAAGCCTA G
 
Protein sequence
MLLCLLGYYP CQYLLCKPTS MITISQAQLV RGSKTLLDET SLTVYPGHKV GLVGANGSGK 
SSLLALILGK ISLDKGEFTM PSGWQMATVA QETPALDVSA IEYVIDGDSE YRELEAELHA
AQEADDGHKI ALLHGKIDAI GGYAIHSRAA SLLAGLGFSE QEQSNPVKSF SGGWRMRLNL
AQALLCRSDL LLLDEPTNHL DLDTMYWLEG WIKAYQGTLI LISHDRDFID GIVDEIVHVE
NTKLNYYKGN YTSFERVRAE RMAQQQVAFE RQQKERAHMQ SFVDRFRYKA SKAKQAQSRL
KALERMAELL PSQADSPFHM AFREPEALPN PLVTMEQVSI GYGETEILKK VHLNLVPGAR
IGLLGRNGAG KSTLVKLLSG ELSPMKGQYE TNPGLNIGYF AQHQLEFLSL DDSPLQHMVR
LAPTTKEQEL RNFLGGYGFN GDMALSPVRP FSGGEKARLV LALLVWQRPN LLLLDEPTNH
LDLEMRHALT MALQTFEGAM IIVSHDRHLL RLSCSDYYLV DQGEVKSFDG DLDDYHQWLL
DAAKTAGKSE ETETGKPVQD KKLQKRLDAE LRQKLSPLKK VQTKLEKEQH KANERLKELE
DMLADTSLYD ADNKAKLTQV LTERTTLTQG LEESEMEWLE IQEEIETIEQ SVRAEA