Gene Spea_3463 details

Gene Information

• Locus tag: Spea_3463
• ID: 5663849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 4230609
• End bp: 4232651
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641238119
• Product: integrase family protein
• Protein accession: YP_001503311
• Protein GI: 157963277

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGATC TCAATAAAAT AATCTCAACC ATCATAAATG TCAGCAACGA TATCGTGGTA 
AAGGAATTAT CTACCAGTGA TATTAACGAA CTATCTCGGC TTGTATTGTG GGACAAAACA 
CCAGACGAAA AGCCGATGAC ATTTGGTGGA AACTACTTTA GACAGTCAAC CAAGGAGAAA 
GGACTTGTAA TTGATACAAG CTCACTAATG TTCGACTACG AACTTAAGAC AATGATGATT 
GCAGCATTAC ACCTTGGAAC AGTAAAAGGC GGCACACCGT ATAAATGGAA GACAGTTGTC 
AGTCGGGTTC GCACATTAAA ATCTTTTTGC TCTTTCTTGC AGACAAAAGG TTACAAGTCT 
TTTAGAGAGT TAAACAAGTC ACCAGAGTTG AAACTTCGGA ATTTAATCAC GGACTTTTTG 
AACGCTCCTA AATCAAAAGG TGGTATGGAG CAGGGGAAGC ACACCTCAGC TGCTAAGACC 
GTCCGTGAGG GATTAACCTT TCTGTATACA TATGGTTTGG TAAATAGCTC ACTACTGGCT 
CCATTGGTCG ATGAACTCAC CATTTCTAAA ATCACGAAAC ATGAAGAACA ACACCGTTTA 
AAGCATTCCA TCATTCCAAC AGGGGTGATG AAGTCAGTGA TTGAGTCATC AACCGACTAC 
ATAAACAACG TTAAGTCCAA CATTGGCTTA TTCATAGAAC CACATACAAA AGCCAACAAA 
AGAATTGAAG GAAATAATTG CAGCAATCCT GGCAGTATCA TTGCGGCGTC CTGCCGTAAT 
TTTGATAATG AACTAGGTTT AGGCTACAAC TTAGTACGAG ACCTAAACCT CCATGTCTAC 
ACATTGGTAT TAGCGTTTAC TGGTATGCGT GATAACGAAG TCTATGCGCT AAAAAACAAC 
AGCCACTCGC AACGAGTAGA AACTGGCGAA ACCGTATTCA CCATCAAAAG TCAACTATCA 
AAAACTACCG AGGGAACGAT TGAGCTGGAT TGGGTTGCAA ATGAAATCGT GTTTGAAGCG 
GTAGACTTAC TGAGTAAGGT TAACGAGATT TACAGGGAGC GCGCTAGATT GATGCTTGAG 
CACCATATGC ACAAGATGCC TAAAGGTCAT TTAGACCGAT ATGAAAAAGG ACTTAAAGAC 
AACCGGTTGT TTGGCATACA ACACACTAAA AATACCGCCA GATTTGTGCA GGCTTCCAGA 
GCGTCGGACG CTAACAGTGG TATCTCTATG AGCAAACATT CATTTCAGGT GACAGCTATT 
GACATCGAGC AGCTTGAAAA AATGAACTGC AACTACCAAT CAGTTAGCCA GCTGAGTGGC 
AAACGAGGCT TAAAATATAA AGTTGGTGAT TTATTTAACT TAACATCGCA TCAATTTAGA 
CATACTTTTG CTTGGTTTAT TATCGCCAAC CGATTAGGTG ATTTAGATGA CATTAAATAC 
CAGTTTAAGC ACCTTAACTC TGTAATGACG TTTGTTTATT CTGAGCGTGG TTATGAATCC 
CTTAGTGAGC TTAGAACGTG CATTGAATAC TTTGAGGAGC TAACCAACAA ACAGGCCATT 
GAAGACATTG TAGAGTCTGC CAAACAAAAA CAGGTAGCAG GAGGAGGTGG TGATAGGCTT 
TCCAAGTTCC TTGCTAAGTT AAACGTTAAT CAATCACAGG TCATTTATAC AACGGCCCAA 
CAACCACATT TCAATAGCAC TCAGGAGTTA ATTGATTTTG CCACTCGCCA CAGTGATAGT 
GTGAGAGGTT TGCCGCATGG CTATTGCACT AAAGGCGCAG GGTGTAAAAT AAAGAATGCG 
TCTGATCCCT CACATTGTTT GTATTGTGAT ACATACTATG CCACCCCCAA ACACTTGCCC 
TATTGGAAAG CGATTAAGTA TAGCTGTGAG CAAAAGATAG CGCGTATTAA TACCTTACCT 
GACACTTCGC GCTACCAGTC CTTCTTAACA GGCTTAGAAG ACAACCTTAA CGCTGCTAAT 
GAAATCATAA ATAACCTTAC TTCCACCACA CCAATTAACG AGCAAACAAC CGTAGAGAGC 
TAA 

 

Protein sequence

MSDLNKIIST IINVSNDIVV KELSTSDINE LSRLVLWDKT PDEKPMTFGG NYFRQSTKEK 
GLVIDTSSLM FDYELKTMMI AALHLGTVKG GTPYKWKTVV SRVRTLKSFC SFLQTKGYKS 
FRELNKSPEL KLRNLITDFL NAPKSKGGME QGKHTSAAKT VREGLTFLYT YGLVNSSLLA 
PLVDELTISK ITKHEEQHRL KHSIIPTGVM KSVIESSTDY INNVKSNIGL FIEPHTKANK 
RIEGNNCSNP GSIIAASCRN FDNELGLGYN LVRDLNLHVY TLVLAFTGMR DNEVYALKNN 
SHSQRVETGE TVFTIKSQLS KTTEGTIELD WVANEIVFEA VDLLSKVNEI YRERARLMLE 
HHMHKMPKGH LDRYEKGLKD NRLFGIQHTK NTARFVQASR ASDANSGISM SKHSFQVTAI 
DIEQLEKMNC NYQSVSQLSG KRGLKYKVGD LFNLTSHQFR HTFAWFIIAN RLGDLDDIKY 
QFKHLNSVMT FVYSERGYES LSELRTCIEY FEELTNKQAI EDIVESAKQK QVAGGGGDRL 
SKFLAKLNVN QSQVIYTTAQ QPHFNSTQEL IDFATRHSDS VRGLPHGYCT KGAGCKIKNA 
SDPSHCLYCD TYYATPKHLP YWKAIKYSCE QKIARINTLP DTSRYQSFLT GLEDNLNAAN 
EIINNLTSTT PINEQTTVES