| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3445 |
|---|
| Symbol | |
|---|
| ID | 5663831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 4210948 |
|---|
| End bp | 4212420 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641238101 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001503293 |
|---|
| Protein GI | 157963259 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAACGAT TAATATTCAT CAACAAAGCG AAAAACTATA TCACCACAGT GACTGTGGCA
GCCCTGTCGA CATTGGCGAT CAGTTTACCT GTTAGTGCGC TAACCAAAAC TGAGCCTGCT
GCCTGCAATC TAAATAAACT CGCTCAGCCC CTCTACGAAG TTGAGCAGAG AATTCAATAT
CGTCAGCTGG ATAATGGTCT GCAAGTGCGC ACCCTGCCCC TTAAAAATAC TCAAGCCGTG
TCAATCGCTA GCCAGTTTGA TGTGGGCTCG CGCAATGAAG TTAAGGGTCA AGCCGGTTAT
GCCCACCTGT TTGAACACAT GCTGTTTAAA GGCAGTAAGC ATGCACCGGG TGATAGCTAT
ACCCAGACCA TGAGCGCCTT AAGCGGCCAG TTTAATGCCA GCACCTTTTT CGATTTCACC
AATTATTACT TAACCATCCC CTCCCAAGCA CTCGAACTGA GCCTATGGCT AGAAGCCGAC
CGCTTTCGCT ACCCAAGCTT GAATGAAACC ACAGTTAAAA ATCAACAAGG CGCGGTGCTT
GAAGAGATGG CCACCAGCAT AGATAACCAG CCCTATGTGC GCAAAGCGAT GGAGTTTTTA
TTGTCTCAGG TTGAAGGGAC GCCCTATGGT CATGCGGTTA TCGGCAGTGT GGCTGATGTC
AAAGCTGCCA CACCACAAAG CTTAAATGCG TTTCATCAAC GCTATTACCG CCCCGACGCC
ATGCAGCTAA GTTTAGTGGG CGATATCCCT AAGCAGACTC AGGATTGGAT AGATGCGCAG
TTTAGCGATT GGCAGGCGCC TGATATCGAG CTGACTCAAA TGGATGATCT TAAGGTTTCG
CCAAAGCCAG TATATGGCGA AATCGTCGAC GAGCGTGGCC CTTGGCCTGC GGTGCTATTT
GCTTGGCACA CAGTTGGCTC AAACTCAAAA GATGCCGCGG GCCTTGCACT GCTGGAAGCT
TATCTGTTTC AAAACAAGAG CAGTCTAATT CAAGGTACTA GCCTTAGCGA TCCCGACCAA
CTGCTGAGTT ACTCGATCCC GTTGACCATG ACCCATCACG GCATGACCAA TCTGGTACTC
GTGCCCCGCG CCCGCACCTC CCTCGATAAG CTCAGTAAGA ATGTCGAGTC ACTGATAGCC
TCTGTCGCCG CGCAGACCCT AGATGATGCA CACCTATGCC AGTTAAAACA AATTTGGCTC
AATAAGGCGT TATCCACTTT AGACTCCCCC TCTCGGCTAG CGAGAAGCCT TTCGGCAACT
CAACCCCGAG ATAAACTCCA TCCGCTTACC GGGCCATGGC AACGTATCGA TGCCGTTAGC
GCTAAAGAGC TTCAAGCCAT CGCCCAGAGG TACTTTATCG GCAATACCGT GCGGCTGGAT
CTGCTGCCCC CTTGGTATAT TCGCGCCACT AAATCGATTC TTGAGTTGTT ACCTAAAGAG
ATGAGCGATA GCCTTGAAGA GAGTGTAATG TGA
|
|---|
| Protein sequence | MKRLIFINKA KNYITTVTVA ALSTLAISLP VSALTKTEPA ACNLNKLAQP LYEVEQRIQY
RQLDNGLQVR TLPLKNTQAV SIASQFDVGS RNEVKGQAGY AHLFEHMLFK GSKHAPGDSY
TQTMSALSGQ FNASTFFDFT NYYLTIPSQA LELSLWLEAD RFRYPSLNET TVKNQQGAVL
EEMATSIDNQ PYVRKAMEFL LSQVEGTPYG HAVIGSVADV KAATPQSLNA FHQRYYRPDA
MQLSLVGDIP KQTQDWIDAQ FSDWQAPDIE LTQMDDLKVS PKPVYGEIVD ERGPWPAVLF
AWHTVGSNSK DAAGLALLEA YLFQNKSSLI QGTSLSDPDQ LLSYSIPLTM THHGMTNLVL
VPRARTSLDK LSKNVESLIA SVAAQTLDDA HLCQLKQIWL NKALSTLDSP SRLARSLSAT
QPRDKLHPLT GPWQRIDAVS AKELQAIAQR YFIGNTVRLD LLPPWYIRAT KSILELLPKE
MSDSLEESVM
|
|---|
| |