Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3405 |
Symbol | |
ID | 5663791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4158870 |
End bp | 4160117 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238061 |
Product | Na+ dependent nucleoside transporter |
Protein accession | YP_001503253 |
Protein GI | 157963219 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTCAAT CCATATTAGG TATCGCAGCC CTACTTATCG TAGGCTACCT TTTTTGTAAT GCTAAAAAAC AAGTTAACTG GCGTACAGTC GGTGGCGCAC TAATCATCCA GCTGACTATC GCAGGCTTTG TTCTAGCTTC CAGCTTTGGT GAAAGCGTAT TACTGGCCGT TTCTAACGGC GTGGCCAATG TACTGGGCTT TGCCGCCAAA GGTATTAGCT TTGTGTTCGG TAATCTAGTG ACCTTCCAAG TTGAGAACTT AGGCTTTATC TTCGCGTTCC AAGTATTGCC AGCAATCATT TTCACCGCCT CATTAGTCAG CTTACTGCAC TACATGGGCA TCATGGGCTT TGTAGTAAAA GTGCTTGGTG GCGGACTGCA AAAAATGATC GGCTCGTCTA AAGCTGAATC AATGAACGCG ATTGCCAACA CAGTTTGCGG CGGAACTGAA GCACCACTAT TTGTTAAGCC TTGGCACCCA CACCTGACTA AATCTGAAAT TTTTGCCATA ATGGTCGGTG GTTTAGCATC AATCGCAGGC TCTGTATTAG CCGGTCTTGC AGGTATGGGC GTTGAAATTA AATATTTGGT TATGGCATGT TTTATGAGTG CCCCAGCAAG TTTATTATTC GCAAAATTGA TTATCCCTGA AACAGAGCAG CCGGTTAATG ATGTACCTGC ACTGCCTGAT GATGAAAAGC CATCTAACTT TATCGATGCT ATCGCTAAAG GCGCTATCGC CGGTATGCAA ATCGCAGCGG TTGTGGGTGC GCTTTTAATA GCCTGTATCG GCCTAATCGC GATGTTAAAC AGCATGATCG GCTGGGCGGG TGGCTTATTT GGCTTTGAGA ATGTAACTCT AGAGCTATTA ATGGGCTATG CGTTTGCGCC AATCGCTTGG TTAATCGGTG TGCCTTGGGT TGAAGCGATT GTTGCAGGTA GTTTTATTGC GCAAAAACTA GTACTAAATG AATTTGTGGC TTTTGCAGGT TTTGCACCTT ACATCTCAGG TGAAACCGTG GTTGCTGCAA CTGGTGAAGT GATGTCACCA AAGTCTGTGG CTATCATCAC CGTTGCGCTA TGTGGCTTTG CTAATATCGG CTCTGTGTCT ATGGTGGTTG CTGCGATAAG CACCATGATC CCTAAGCAGG CTAGCTATAT TGCTTCTGTT GGCATGAAGG TACTTTTAGC TGCAACACTG GCTAACCTAT TATCGGCAAC CGTTGTTGGT CTATTTATGT CTTTCTAA
|
Protein sequence | MFQSILGIAA LLIVGYLFCN AKKQVNWRTV GGALIIQLTI AGFVLASSFG ESVLLAVSNG VANVLGFAAK GISFVFGNLV TFQVENLGFI FAFQVLPAII FTASLVSLLH YMGIMGFVVK VLGGGLQKMI GSSKAESMNA IANTVCGGTE APLFVKPWHP HLTKSEIFAI MVGGLASIAG SVLAGLAGMG VEIKYLVMAC FMSAPASLLF AKLIIPETEQ PVNDVPALPD DEKPSNFIDA IAKGAIAGMQ IAAVVGALLI ACIGLIAMLN SMIGWAGGLF GFENVTLELL MGYAFAPIAW LIGVPWVEAI VAGSFIAQKL VLNEFVAFAG FAPYISGETV VAATGEVMSP KSVAIITVAL CGFANIGSVS MVVAAISTMI PKQASYIASV GMKVLLAATL ANLLSATVVG LFMSF
|
| |