| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3385 |
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| Symbol | |
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| ID | 5663772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4136672 |
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| End bp | 4139404 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641238042 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001503234 |
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| Protein GI | 157963200 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA CCAAGAAATT CGCACTATCG ACGCTTACTG TAGCGATGAT ATCTTTTGCT
CCAGTGACTA CCACATCAGT TTTTGCGGCA GAAGAAGAGA AGATAGAAAA AATAATGGTT
ACAGGCTCAC GCATTGGACG TGCAGAGCTT GAATCTAGCT CGCCCATCAC CGTAGTAACA
AAAGTGCAGC TAGATAACCT AGGGGTTACC GATGTCAGCG CAGCATTACG TCGTTTGCCT
GCAATAACTG GAGCCACATC TAACAACCAA AGTAGCGCCG GTGCTGTCAA TATTCAAACA
GCAACGCTAC GTGGTATTGA AGCGACTAAC ACCTTGGTGC TTTTAAATGG TCGCCGTATG
GTGGGTTCTA ATGAAGATGG CTTGGTTGAT CTTTCATCTA TTCCATTTGA GGCCGTTTCT
CAAATTGAGG TCTTAAAAGA TGGTGCATCT GCAATTTATG GTTCAGATGC CATTGCCGGC
GTAGTAAATA TTATTACCTA TCAAAATTAT GAAGGTTTTG AGGTCAACGC TCGCTATGGG
GTGTCATCTG AAGGTGATGC ACAAGAGCGT GAAGTTGGCT TACTTATGGG CTTTAGTACC
GACAAAGGTA GCCTTATGGT TGCCGCTTCC ACGAGCAATA ATTCAGGCTG GGAAGAGAAA
GACCGTTACA TGACCCAAGA TACTGATCAA AGCTATCTAG GGGGAGGTGA TACCAGTTCA
GGGACGACAC CATTTGCGCG TTTATCCGGT TTTGGGCTTG ATCCGAGTGA GACATGGACA
GTCCTAGATG CCAACAATCC CTCTGCAGTG ACTCCGTTCG ATTACGATAC CATGGGGTAC
AATTATCGTG CCGCTCAGTC TGGCGCCAAT GATAATCAAA CCACGAGTGT TTTTGTCAGC
GGTGATTATG AGCTTACTGA TGATATGCTA TTTTTTACCG AGCTATCCTT TCATGATGGC
TTTGTGCAAG GTAACCAAGC GCCTCCAGGT ACAGATACAG GCTGGTATGG AGATAATGTT
GATACCCCGA ATGCATTTAA ACGTTACCCA GATGCTGATG GAAACAACTT TGGCGTGGGC
GCAAACCAAA AATACAACCC ATTTGGCATA GCGGGTAACG TGAGCCGTCG CTTTAGTGAG
TATGGCTCGC GCATTTATAA AACAGATAAC ACTGTTCAGC GATATACCTT AGGCTTAAAA
GGCGCCATCT TTGATGAGTA TGACTGGGAG GTTAGCTACT CTAGCCAGAG TGCGGAGTTG
GTCCAGCGAG GTGGTGCACA GCCATCTATT ATGCAAATTG AGCGTGCACT TTCTGATGAA
TGTGAAACAG CGGCAGATCC AAGTTGTGTC GCGTTAAATG TGTTTGGCCC AGAGGGTTCA
ATCACGACTG AAATGCTTGA TTTTATCAAT ACAACCGCTC CAGTAACGAC CAATAAAAAT
GATTTGATGT TTATTCAGGC TCATATCTCA GGACCGATAG TGTCTTTGCC TGCTGGCGAC
TTGATGTTCT CGTCAGGTGT TGAGTATCGC GAAGATCAAC TTTCTTTAGA AGTAGATCAA
GCGCAACGTA CTGCAACATT TGATGTATCT TGGGGCGGCT CTAGCACTCC TGTTATATCC
CCTGTACGTG AAATCTCAGA GTTTTATTTA GAGCTAGCGG TTCCAGTGCT TGATAACTTA
GATATTGAAC TCGCTGCACG TTACAGTGAT TACAGTGATA TTGACGAAAG TACCACAAAC
CCAAAAGTGG GTGTTATTTA TCAGCCGCTT GATATGCTGA AGTTGCGAGG AAGCTACAGT
ACCGGTTTCC GCGCTCCAAC CATGGCGCAA ATGTATCAAG GGCGAACATC ATCGATCAAT
ACCAACCTGT ATGATCCTTG TAACCCTGGC AATGAAGCTA ATTTTAGTTC TAGCAAGCCT
GAGTGTGTCG CCCTTGGTTT AGACCCAGCC TTTAGTCAAA ATGCGATCCA AAGCAATGAC
ATTATTGGCG GTGGTAACCC AGACCTTAAG CCTGAAGAAG CTGAGAACAC TACCTTAGGC
TTAGTTATCG AGCCAATAGA TAACCTTTCA TTAACTCTTG ATTATTTTGC TATCGAACAA
ACTAACGTGG TGTTTGCAAG TTCTCGCTAT GTAATCGATC AAAACTTAGC GGGCAACCCA
ACTTATGCTG GTGATGTTAT ACGTAGCAAC AATGGTACGG GATATATTCA AACGATTTAT
TCGCCAGCGA ATAATATTGC ATCACGTAAC TTATCTGGTT ACGACTTGAA TGCAAATTAT
CGTTTCGAGA CGGATATTGG TGATTGGAGC ATTAACTTCG ATGGTACGTA TTTAAGTGAG
TTTGAAGTTC AAGATACCAG TGATTCAGCA TTTAGAGATA TTACGGGTAC TTATGATCCA
GCATTTGGTA GCCTTCCTGA GTATAAGGCG AATATCCAAA TTGATTGGAC AATGGGGAAC
TACCGTGCGA CTTGGGATGC TAATTACAAT TCAGAAATCT TTGCCGGTGA AGCTACAGAA
GAATTTGAAG CAGATATCAT GTCATCGACA GTATTCCATA ATATGCAAGT AGGCTATTTT
GTTGATGCTA TTGGTGTCGA TTTACATGCA GGCATTCAAA ATGTGTTTGA TAAAGAGCCT
CCATTCTTAA GGGCTAACGG AACATCGACT GATGATAATT TATATTCATT CCGTGGCCGA
TTCTTTTACT TTGGTTTGAA AAAATCATTT TAA
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| Protein sequence | MNMTKKFALS TLTVAMISFA PVTTTSVFAA EEEKIEKIMV TGSRIGRAEL ESSSPITVVT
KVQLDNLGVT DVSAALRRLP AITGATSNNQ SSAGAVNIQT ATLRGIEATN TLVLLNGRRM
VGSNEDGLVD LSSIPFEAVS QIEVLKDGAS AIYGSDAIAG VVNIITYQNY EGFEVNARYG
VSSEGDAQER EVGLLMGFST DKGSLMVAAS TSNNSGWEEK DRYMTQDTDQ SYLGGGDTSS
GTTPFARLSG FGLDPSETWT VLDANNPSAV TPFDYDTMGY NYRAAQSGAN DNQTTSVFVS
GDYELTDDML FFTELSFHDG FVQGNQAPPG TDTGWYGDNV DTPNAFKRYP DADGNNFGVG
ANQKYNPFGI AGNVSRRFSE YGSRIYKTDN TVQRYTLGLK GAIFDEYDWE VSYSSQSAEL
VQRGGAQPSI MQIERALSDE CETAADPSCV ALNVFGPEGS ITTEMLDFIN TTAPVTTNKN
DLMFIQAHIS GPIVSLPAGD LMFSSGVEYR EDQLSLEVDQ AQRTATFDVS WGGSSTPVIS
PVREISEFYL ELAVPVLDNL DIELAARYSD YSDIDESTTN PKVGVIYQPL DMLKLRGSYS
TGFRAPTMAQ MYQGRTSSIN TNLYDPCNPG NEANFSSSKP ECVALGLDPA FSQNAIQSND
IIGGGNPDLK PEEAENTTLG LVIEPIDNLS LTLDYFAIEQ TNVVFASSRY VIDQNLAGNP
TYAGDVIRSN NGTGYIQTIY SPANNIASRN LSGYDLNANY RFETDIGDWS INFDGTYLSE
FEVQDTSDSA FRDITGTYDP AFGSLPEYKA NIQIDWTMGN YRATWDANYN SEIFAGEATE
EFEADIMSST VFHNMQVGYF VDAIGVDLHA GIQNVFDKEP PFLRANGTST DDNLYSFRGR
FFYFGLKKSF
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