| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3366 |
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| Symbol | |
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| ID | 5663753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4111275 |
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| End bp | 4112432 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641238023 |
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| Product | porin |
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| Protein accession | YP_001503215 |
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| Protein GI | 157963181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA AACTGTTGGC GCTTTTAATC CCGTCGATTT TAATAGCAGG TTCTGCGCAG
GCCGTTGAGA TCTACAATGA TCAAACGAAC AGCATAAACA TGATGGGTTG GTTAGGCTTT
GCTGCCATTA ATGACACTCA CGACACTGCC GTCGTCGATA ACTTCTCTCG TGTAGGCTTT
CGCTTCGATC GCCAAGAGAA GAACGGCTGG CGCAGCTTTG CTCATACCGA ATGGGGCATT
AACATGGTCA CCAGCGATGA CTCGCTAAGC TACAGCGGCG GTCAACTCGG TGCAGAGAAA
AACTCTGACT TCTTATTCAA CCGTTTAGGC TATGTGGGTT TAGCAAACGA CAAATGGGGA
AGCTTAACTT TTGGTAAGCA GTGGGGCGTA TACTACGATG TGGCCTACAC CACCGACGTA
CTTAACGTCT ATACGGGCTA CTCTGTTGGA GCCTACACCT TTGGTGATGG CGGCCTAACC
GGTGCTGGTC GCGCAGACTC AGCCTTTGTA TACCGTAACT CATTTGGCAA CTTGAGCATT
GCACTGCAGT ATGCCGCTAA GCAAAATGGT GATGTAGCAC TGTATGACAA AGATGGCATC
GCACTCGACG ACGGTTCACA CGTTGAATTT GATACCAGTT ATGGCGCTAG CTTAACCTAC
CACTTTACCG ATAAATTCAA GGTACTTGCA GGCATTAACC GAGGTGACTT CACTGGTGAA
CTTGCAGGTG AGCGCGTTGA CGATACTAAC GAGATCATAG GTGTGGGCGC ACAATATGGT
TCTTTCTACC AGTATGCACC TAATCGCGAA GCCGATGGCT TCTATGTGGG TTTCAACGCT
CATAAGAGTA AGCAAAATGA GCTAGTAGCG GGCGAGCTAT ATGACTCGAC TGGCAGTGAG
TTTTTGATTG CCTATCAGTA TGAGAATGGC TTTGTACCTA GCTTCCTACT GTCTTACCAA
GACTTAGATA CCGATGCTTC GACAACGATT CAAGGTGACT GGACCCGCCA ATTTGCGGTA
CTCGGTCTAC ATTACCGTTA TAGCAACGAC ACAGTGATGT TTGCCGAAGC AAAAATCGAT
TTCAGCGACA TGGACGATAA GAGCTTTGAA AACCTTCAGG ACAATAGCTA CGCTGTCGGT
ATTCGCTACT TCTTCTAG
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| Protein sequence | MNKKLLALLI PSILIAGSAQ AVEIYNDQTN SINMMGWLGF AAINDTHDTA VVDNFSRVGF
RFDRQEKNGW RSFAHTEWGI NMVTSDDSLS YSGGQLGAEK NSDFLFNRLG YVGLANDKWG
SLTFGKQWGV YYDVAYTTDV LNVYTGYSVG AYTFGDGGLT GAGRADSAFV YRNSFGNLSI
ALQYAAKQNG DVALYDKDGI ALDDGSHVEF DTSYGASLTY HFTDKFKVLA GINRGDFTGE
LAGERVDDTN EIIGVGAQYG SFYQYAPNRE ADGFYVGFNA HKSKQNELVA GELYDSTGSE
FLIAYQYENG FVPSFLLSYQ DLDTDASTTI QGDWTRQFAV LGLHYRYSND TVMFAEAKID
FSDMDDKSFE NLQDNSYAVG IRYFF
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