Gene Spea_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3364 
Symbol 
ID5663751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4108324 
End bp4109055 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content48% 
IMG OID641238021 
ProductABC transporter related 
Protein accessionYP_001503213 
Protein GI157963179 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCGA TGAACAACAT CAGCAAAGTA TTTAAAACGG ATTTAGTGGA AACTCATGCA 
TTACGAGACT TTAACTTAGA GGTCAAGGAA GGCGAGTTTG TTGCAGTTAC CGGGCCTTCT
GGTTCGGGTA AAACCACCTT CTTGAACATT GCTGGCTTAC TCGAAGGTTT TACCCATGGT
GACTATTTTC TCGATGGTGT GAATATTTCA AATCTGAGTG ACAACAAGAG TGCAGCGATT
CGAAACGAGA AGATTGGCTT TATCTTTCAA GGCTTCAATC TTATCTCTGA TCTAAATTTG
GCCGAGAACG TCGAGGTCCC GCTGCGTTAC CGCGGTTTTA ATGCTAAGGA GCGAAAAATC
CGGGTCGAAC GTGCGCTAGA GCAGGTGGGA CTCGCCTCGA GAATGAAGCA TTTTCCCACG
CAGCTCTCAG GTGGGCAGCA GCAGCGAGTG GCGATAGCTA GAGCGTTAGC GGGTGAGCCA
AGGTTTTTAC TCGCCGATGA GCCGACTGGT AATCTCGATA GTTTAATGGC GCGCCAAGTG
ATGGAGCTAC TTGAAGATAT TAACAAGGCT GGCACCACGA TTATCATGGT AACTCACGAT
GCGGAGTTGG CTCGTCGTGC TCAGCGTAAT ATTCAGATTG TCGATGGTCA TGTGTGTGAT
TTCACCATGT ATCAAGCAGG CACCGGTCAA GGTAAAGCTG AGGCGGTAGC CAAGACAGCT
TCAGTTGCTT AA
 
Protein sequence
MLSMNNISKV FKTDLVETHA LRDFNLEVKE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG 
DYFLDGVNIS NLSDNKSAAI RNEKIGFIFQ GFNLISDLNL AENVEVPLRY RGFNAKERKI
RVERALEQVG LASRMKHFPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLEDINKA GTTIIMVTHD AELARRAQRN IQIVDGHVCD FTMYQAGTGQ GKAEAVAKTA
SVA