Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3364 |
Symbol | |
ID | 5663751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4108324 |
End bp | 4109055 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238021 |
Product | ABC transporter related |
Protein accession | YP_001503213 |
Protein GI | 157963179 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCGA TGAACAACAT CAGCAAAGTA TTTAAAACGG ATTTAGTGGA AACTCATGCA TTACGAGACT TTAACTTAGA GGTCAAGGAA GGCGAGTTTG TTGCAGTTAC CGGGCCTTCT GGTTCGGGTA AAACCACCTT CTTGAACATT GCTGGCTTAC TCGAAGGTTT TACCCATGGT GACTATTTTC TCGATGGTGT GAATATTTCA AATCTGAGTG ACAACAAGAG TGCAGCGATT CGAAACGAGA AGATTGGCTT TATCTTTCAA GGCTTCAATC TTATCTCTGA TCTAAATTTG GCCGAGAACG TCGAGGTCCC GCTGCGTTAC CGCGGTTTTA ATGCTAAGGA GCGAAAAATC CGGGTCGAAC GTGCGCTAGA GCAGGTGGGA CTCGCCTCGA GAATGAAGCA TTTTCCCACG CAGCTCTCAG GTGGGCAGCA GCAGCGAGTG GCGATAGCTA GAGCGTTAGC GGGTGAGCCA AGGTTTTTAC TCGCCGATGA GCCGACTGGT AATCTCGATA GTTTAATGGC GCGCCAAGTG ATGGAGCTAC TTGAAGATAT TAACAAGGCT GGCACCACGA TTATCATGGT AACTCACGAT GCGGAGTTGG CTCGTCGTGC TCAGCGTAAT ATTCAGATTG TCGATGGTCA TGTGTGTGAT TTCACCATGT ATCAAGCAGG CACCGGTCAA GGTAAAGCTG AGGCGGTAGC CAAGACAGCT TCAGTTGCTT AA
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Protein sequence | MLSMNNISKV FKTDLVETHA LRDFNLEVKE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG DYFLDGVNIS NLSDNKSAAI RNEKIGFIFQ GFNLISDLNL AENVEVPLRY RGFNAKERKI RVERALEQVG LASRMKHFPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLEDINKA GTTIIMVTHD AELARRAQRN IQIVDGHVCD FTMYQAGTGQ GKAEAVAKTA SVA
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