Gene Spea_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3358 
Symbol 
ID5663746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4101787 
End bp4102359 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID641238016 
ProductTetR family transcriptional regulator 
Protein accessionYP_001503208 
Protein GI157963174 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTA TCGACAAAAA ACAGGCCATA TTAGACACAG CGCTGACGCT TTTTGTCAGC 
CAAGGTTTTT ATGCCACCTC TACCGCCTCG ATTGCCAAAC AAGCCGGGGT TGCTACCGGC 
ACCCTATTTC ATCATTTCGC CTCAAAAGAG GCGTTGATGA ACCACCTGTA TATATCCATT 
AAGCAGGAGT TCGCCGATGG GATTCAATCG CAAATCAGTC AAAAGGGCGA CTTAGAAAAA 
GATGCTCAAC ACCTGTGGCA GGTCGCCATA AATTGGGCGA TGGCGAACCC ACTTAAACAG 
GAGTTTTTCC AGCAATACTC TATGTCTCCG TCGATCGCAT CCCAGGTAAG ACAACAGGCC 
ATGAACAGTA TTTTAGGCTT TATGGGCGAG TTAATTCATC AAGGGCAAAA AGCAGGCGTA 
CTAGCAGATT ATCCGCTACC CTTAATGCTA GAGAGTTGTC ATGGCCAATA TTTAGCGGCA 
ACACGATATT TTCTAGACAA CCCTGAGTCA TGGAAAGATG AAACATATAA ACAGTCAAGT 
TTTGCAATGT TTTGGAATGC AATGAAGACC TAG
 
Protein sequence
MSRIDKKQAI LDTALTLFVS QGFYATSTAS IAKQAGVATG TLFHHFASKE ALMNHLYISI 
KQEFADGIQS QISQKGDLEK DAQHLWQVAI NWAMANPLKQ EFFQQYSMSP SIASQVRQQA 
MNSILGFMGE LIHQGQKAGV LADYPLPLML ESCHGQYLAA TRYFLDNPES WKDETYKQSS 
FAMFWNAMKT