Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3322 |
Symbol | |
ID | 5663710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4064078 |
End bp | 4065676 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641237980 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001503172 |
Protein GI | 157963138 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000803182 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATACG ATTCAGACTC AACTCTAGAC CTATCGCGTT ACGCTTCCCT TATCGATCTA ATAGAGCTTG CCAGTGCCCG CTACGGTGAC AAGGCTGCTT ATTCATGCCT TGGTCAAGAA ACTAGCTTTA ACGAAATCAA CCGCTATTCA CGCCAGTTTG CCGCTTATCT CCAGCAGGAA ACCAACCTAG TACAAGGAGA CAGAATTGCC ATTCAGCTGC CCAACATTAC CCAGTTTGTT ATCGCGGCTT ACGGTGCAAT CAAGGCAGGA ATGGTGCTGG TTAATACCAA TCCACTCTAT ACTCAGCGCG AACTCATTCA CCAGTTCAAC GACTCGGGCG CCAAGGCCTT AGTGGTACTG TCTGACTTAT TACCCACATT AACTGAAGTG GTTGAGAACA CAGGTATCGA AACTGTCATC TCAACCCATG CGATGGATTT AATCGCGCCG CAGCCACAAC CTGAAGTCCC CTTTGCTACA GTGCCTTTTT GTGAGGTGTT AGCAAAAGGA GAACAGCTTA CCTACGCGCC AGTTATCAGC GTGCTCGGCC AGATTGCAGC CTTGCAGTAC ACAGGTGGCA CCACAGGTCT TTCAAAAGGC GCCATGCTGA CCCACGGCAA TTTAATCGCC AATGCGATGC AAATTAAGTC TCGTTTAGGT AGCCGAATTA TTGAAGGTGA GGAGATCTTC GTCGCGCCAT TACCTGTGTA TCATATCTAC GCCTTTATGG TGAATCTGGT GCTTTATTAT GAGCGCGGCG GCTGCTCGGT ATTAATCCCT AATCCGCGAG ATATAGCTGG GCTAATTTCA ACCCTATCAA AGTATCCTTT TACCGGCTTT GCAGGTCTTA ACACCTTGTT TGTTGGCCTT TGTCACCAGC CCGAATTTAA GGCGCTGGAC TTTAGTCACC TTAAAGTCAC CATTTCTGGC GGCACCGCAC TCACCCAAGC GGCGGCTAAC ATTTGGCAGC AAACAACAGG CTGCACCATC TCTGAGGGCT ACGGCTTATC GGAAACCTCA CCCGTGGTAT CACTCAACTC ACCAGGACTT GAGCAACTCG GCACCATAGG TAAGCCAGTG ATTGCTACTC AAGTGAAAAT CTTGGATATG GATGATAACG AAGTGGCCAT TGGTGAAACG GGTGAGCTTG CGGTATTTGG TCCGCAGGTG ATGCTAGGTT ACTGGAATAA CCAGACTGAG ACCGACAAAG TGATGACCAA AACAGGCTTC TTTAAGACCG GGGATATTGC TATTGCTACT GAAGATGGCT TTCATAAAAT CGTCGATCGC AAGAAAGATA TGATTATCGT CTCTGGCTTT AATGTTTACC CAAATGAGGT CGAAGATATC TTATCTAACC ATGATGCTAT TTTGGAATGT GCCGTGATTG GCGTTAACGA TGAACGCAGC GGTGAAGCGG TGAAAGCCGT AATCGTGCTC AATGATAGCC ATGCAGACAA AGACCAAGCC ATCACTATGA TAGATAGCTA CTGCCGTGAG CAACTTGCCG CCTATAAGGT ACCTAAAATC ATCGAATTTG TTGAAGTTCT GCCTAAGTCT ACCGTCGGCA AAATTTTGAG ACGCGAACTA CGCAAGTAG
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Protein sequence | MAYDSDSTLD LSRYASLIDL IELASARYGD KAAYSCLGQE TSFNEINRYS RQFAAYLQQE TNLVQGDRIA IQLPNITQFV IAAYGAIKAG MVLVNTNPLY TQRELIHQFN DSGAKALVVL SDLLPTLTEV VENTGIETVI STHAMDLIAP QPQPEVPFAT VPFCEVLAKG EQLTYAPVIS VLGQIAALQY TGGTTGLSKG AMLTHGNLIA NAMQIKSRLG SRIIEGEEIF VAPLPVYHIY AFMVNLVLYY ERGGCSVLIP NPRDIAGLIS TLSKYPFTGF AGLNTLFVGL CHQPEFKALD FSHLKVTISG GTALTQAAAN IWQQTTGCTI SEGYGLSETS PVVSLNSPGL EQLGTIGKPV IATQVKILDM DDNEVAIGET GELAVFGPQV MLGYWNNQTE TDKVMTKTGF FKTGDIAIAT EDGFHKIVDR KKDMIIVSGF NVYPNEVEDI LSNHDAILEC AVIGVNDERS GEAVKAVIVL NDSHADKDQA ITMIDSYCRE QLAAYKVPKI IEFVEVLPKS TVGKILRREL RK
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