Gene Spea_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3322 
Symbol 
ID5663710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4064078 
End bp4065676 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content48% 
IMG OID641237980 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001503172 
Protein GI157963138 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000803182 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACG ATTCAGACTC AACTCTAGAC CTATCGCGTT ACGCTTCCCT TATCGATCTA 
ATAGAGCTTG CCAGTGCCCG CTACGGTGAC AAGGCTGCTT ATTCATGCCT TGGTCAAGAA
ACTAGCTTTA ACGAAATCAA CCGCTATTCA CGCCAGTTTG CCGCTTATCT CCAGCAGGAA
ACCAACCTAG TACAAGGAGA CAGAATTGCC ATTCAGCTGC CCAACATTAC CCAGTTTGTT
ATCGCGGCTT ACGGTGCAAT CAAGGCAGGA ATGGTGCTGG TTAATACCAA TCCACTCTAT
ACTCAGCGCG AACTCATTCA CCAGTTCAAC GACTCGGGCG CCAAGGCCTT AGTGGTACTG
TCTGACTTAT TACCCACATT AACTGAAGTG GTTGAGAACA CAGGTATCGA AACTGTCATC
TCAACCCATG CGATGGATTT AATCGCGCCG CAGCCACAAC CTGAAGTCCC CTTTGCTACA
GTGCCTTTTT GTGAGGTGTT AGCAAAAGGA GAACAGCTTA CCTACGCGCC AGTTATCAGC
GTGCTCGGCC AGATTGCAGC CTTGCAGTAC ACAGGTGGCA CCACAGGTCT TTCAAAAGGC
GCCATGCTGA CCCACGGCAA TTTAATCGCC AATGCGATGC AAATTAAGTC TCGTTTAGGT
AGCCGAATTA TTGAAGGTGA GGAGATCTTC GTCGCGCCAT TACCTGTGTA TCATATCTAC
GCCTTTATGG TGAATCTGGT GCTTTATTAT GAGCGCGGCG GCTGCTCGGT ATTAATCCCT
AATCCGCGAG ATATAGCTGG GCTAATTTCA ACCCTATCAA AGTATCCTTT TACCGGCTTT
GCAGGTCTTA ACACCTTGTT TGTTGGCCTT TGTCACCAGC CCGAATTTAA GGCGCTGGAC
TTTAGTCACC TTAAAGTCAC CATTTCTGGC GGCACCGCAC TCACCCAAGC GGCGGCTAAC
ATTTGGCAGC AAACAACAGG CTGCACCATC TCTGAGGGCT ACGGCTTATC GGAAACCTCA
CCCGTGGTAT CACTCAACTC ACCAGGACTT GAGCAACTCG GCACCATAGG TAAGCCAGTG
ATTGCTACTC AAGTGAAAAT CTTGGATATG GATGATAACG AAGTGGCCAT TGGTGAAACG
GGTGAGCTTG CGGTATTTGG TCCGCAGGTG ATGCTAGGTT ACTGGAATAA CCAGACTGAG
ACCGACAAAG TGATGACCAA AACAGGCTTC TTTAAGACCG GGGATATTGC TATTGCTACT
GAAGATGGCT TTCATAAAAT CGTCGATCGC AAGAAAGATA TGATTATCGT CTCTGGCTTT
AATGTTTACC CAAATGAGGT CGAAGATATC TTATCTAACC ATGATGCTAT TTTGGAATGT
GCCGTGATTG GCGTTAACGA TGAACGCAGC GGTGAAGCGG TGAAAGCCGT AATCGTGCTC
AATGATAGCC ATGCAGACAA AGACCAAGCC ATCACTATGA TAGATAGCTA CTGCCGTGAG
CAACTTGCCG CCTATAAGGT ACCTAAAATC ATCGAATTTG TTGAAGTTCT GCCTAAGTCT
ACCGTCGGCA AAATTTTGAG ACGCGAACTA CGCAAGTAG
 
Protein sequence
MAYDSDSTLD LSRYASLIDL IELASARYGD KAAYSCLGQE TSFNEINRYS RQFAAYLQQE 
TNLVQGDRIA IQLPNITQFV IAAYGAIKAG MVLVNTNPLY TQRELIHQFN DSGAKALVVL
SDLLPTLTEV VENTGIETVI STHAMDLIAP QPQPEVPFAT VPFCEVLAKG EQLTYAPVIS
VLGQIAALQY TGGTTGLSKG AMLTHGNLIA NAMQIKSRLG SRIIEGEEIF VAPLPVYHIY
AFMVNLVLYY ERGGCSVLIP NPRDIAGLIS TLSKYPFTGF AGLNTLFVGL CHQPEFKALD
FSHLKVTISG GTALTQAAAN IWQQTTGCTI SEGYGLSETS PVVSLNSPGL EQLGTIGKPV
IATQVKILDM DDNEVAIGET GELAVFGPQV MLGYWNNQTE TDKVMTKTGF FKTGDIAIAT
EDGFHKIVDR KKDMIIVSGF NVYPNEVEDI LSNHDAILEC AVIGVNDERS GEAVKAVIVL
NDSHADKDQA ITMIDSYCRE QLAAYKVPKI IEFVEVLPKS TVGKILRREL RK