Gene Spea_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3244 
Symbol 
ID5663633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3978674 
End bp3980059 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content49% 
IMG OID641237903 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_001503095 
Protein GI157963061 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC CAAGCAATAA ACAACATGCT TCAACTAATG AAGAGCCCGT AGGAGCTTGT 
GCTTCTGCCC AACCTGCAAG TGGTGGGTTG TTAGAGCGCT TTTTTAAATT ATCAGCCCAT
AACACTTCAG TCTCAACTGA GGTGATTGCG GGTATCACCA CCTTTATGAC CATGGTGTAT
ATCGTGTTCG TGAATCCACA AATCCTATCT GCTGCTGGTA TGGATGCCAG TGCGGTGTTT
GTGGTTACCT GTTTGATCAG CGCTATCGGC TGTATCGGCA TGGGCTTAAT TGCCAATTTG
CCAATCGCAC TCGCGCCAGC AATGGGACTC AATGCTTTTT TTGCCTTCTC TGTTGTCGTA
GGCATGGGCG TGAGTTGGCA AATCGGTATG GGCACCATTT TTTGGGGCGC CGTTTGTTTT
GCTATCGTGT CGCTATTAGG GATCCGCTCG TGGATCTTAA CCAATATCCC AAAATGTCTA
CGCATAGGTA TTCCAAGTGG TATTGGTTTG CTAATCGCCA TGGTTGGCTT TAGTAACGCG
GGCATTGTGG TCGCAAGCCC TGCGACTATG ATCACCGTCG GTGACTTAAG CTCGCTGCAA
TGTGTGTTAG GCGCGTTAGG CTTCTTTATC ATCGTTATTC TAGCCTCTCG TGGTATCCAT
TCTGCAGTAT TGGTGTCGAT TGCTATCGTG ACGGCTATTG CGGCCTTAAT GGGCGATATC
GAGTACACCG GCATTGTGTC TATGCCACCA AGCATCGCCA ATACCTTTGG TCAGCTAGAT
CTTGCTGGAT CTTTAGATGT GGCGCTAATG GGGGTGATTT TCTCGTTTGC GCTTGTGAGC
CTATTTGATA GCTCTGGCAC AATGATTGGC GTAACAGAAA AGTGTGGCTT TACCGACAAG
CGCGGCCGCT TTCCACGCAT GAAGCAAGCC TTGTTGACCG ACTCGGCAAC TTCAGTCGCT
GGCGCCTATA TGGGGACCTC TACGGTAACC GCTTATATTG AAAGTTCGGC AGGTGTCGCT
GCGGGTGGCC GCACAGGCTT AACTGCGATC GTCGCCGGTC TACTGTTTAT TCTGGTGATC
TTCTTCTCGC CATTGGCGGC TATGGTACCG GGTTACGCGG TTGCTGGCGC GCTAGTTTAT
GTGGGCATTT TGATGTCATC AGAGCTGGCT AAAATTGATG GTAAAGACTT AACCGAGTCG
GCTCCAGCCT TTATTACCGC GGTGATGATG CCGTTTACTT TCTCGATTAC CGAAGGCGTG
GCGGCAGGTT TTATTACCTA CTGTGTGCTA AAAGCGGGTA CCAATCGCTG GCGTGAAATC
CACCCTGGCG TGGCGTTAGT GGCTCTGCTG TTTATTATCA AATTTGCTTT TGTTGATGGG
CATTAA
 
Protein sequence
MSTPSNKQHA STNEEPVGAC ASAQPASGGL LERFFKLSAH NTSVSTEVIA GITTFMTMVY 
IVFVNPQILS AAGMDASAVF VVTCLISAIG CIGMGLIANL PIALAPAMGL NAFFAFSVVV
GMGVSWQIGM GTIFWGAVCF AIVSLLGIRS WILTNIPKCL RIGIPSGIGL LIAMVGFSNA
GIVVASPATM ITVGDLSSLQ CVLGALGFFI IVILASRGIH SAVLVSIAIV TAIAALMGDI
EYTGIVSMPP SIANTFGQLD LAGSLDVALM GVIFSFALVS LFDSSGTMIG VTEKCGFTDK
RGRFPRMKQA LLTDSATSVA GAYMGTSTVT AYIESSAGVA AGGRTGLTAI VAGLLFILVI
FFSPLAAMVP GYAVAGALVY VGILMSSELA KIDGKDLTES APAFITAVMM PFTFSITEGV
AAGFITYCVL KAGTNRWREI HPGVALVALL FIIKFAFVDG H