Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3232 |
Symbol | |
ID | 5663621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3962085 |
End bp | 3963554 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641237891 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001503083 |
Protein GI | 157963049 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATGA CTCTGTCTTT TTTAGGTGCG ACTCAGGAAG TGACAGGCTC TTGTCACTTA CTCACGATTG ATGGACGACA AGTGCTGCTC GATTGCGGCT TGATCCAAGG GAGTAAGGCC GATGTGTTGC GTAATCACGA GCCTTTTGCC TTCACTCCAT CACAGATCCA CGCAGTAGTT TTAAGTCATG CTCATATCGA TCACTCAGGT CGGCTCCCTC TGTTAGTTAA ATCTGGGTTT ACAGGCCCTA TCTATAGCCA CAAGGCCACG GTAGAGCTGT GTGGCGTCAT GCTAAAAGAT GCCGCCATGT TGCAGGCAAG AGATACTGAA AGACTCAACA AGAAAAGGGC AAAGAATGAT CTGCCTTTGC TTGACCCCTT ATTTGATGAA GCTGATGTTG AGCGAGTGAT GCTACAGTTT GTGGCACTAG ATTATGGCGA GAATAAAGAG GTGGCCCCTC ATCTTAAAGT ATGTCTGTCG GATGCGGGGC ATATTTTGGG CTCTGCTGTG GTTGAGCTTT GGTTAGGAGA AGGTTCAGAA ACTAAGAAAC TGGTATTTAG TGGCGATCTA GGCCGCGAGG GGATGCCGAT TCTTGATGAT CCAACATTCA TCGATAGCGC AGATCTGGTG TTGATGGAAA GTACTTATGG TGACAGGCTG CATCGCAGTT GGGATGATAC CCTTGAGGAG TTGAGAGCGA TATTTGCCCG CACCATTGAA CAGAGTCGTG GCAATATTCT GTTGCCAGCA TTTTCGGTTG GCCGAGCGCA GGAGCTGCTC TACCTGTTTC ATCTCTACGC TAAGGAGTGG GATCTCTCTC GCTGGCGGAT CTGCCTCGAT AGCCCTATGG CAATCAAAGC GACACAGATC TATGTCGATA ATTATGGCCT TATGGATGAG GATTTTAAAC GCTTCACCCA TATGTCTCCC GGCAAGCACC CTCTACTGTC CAATGTGGAC TTTATCGACA CCACTGAGGA GTCGATGGAG CTCAACCATA TCCACCAAGG ACTAATTATT ATCGCAGGTA GCGGCATGTG TAACGGTGGT CGAATCCGTT GTCACTTAGA GCACAACTTA GCTAATAGCT TCTCTGACGT GATTATTTGT GGCTATCAAG CGCATGGTAC TCCTGGGCGA CTCTTGGTGG ATGGCGCAGA GAGTCTGACT ATCAGTGGGC AAAGCATTAA TGTGGCGGCA AGGTTACATA CGGTCGGAGG ACTCTCGGCT CATGCGGATC AGGCGGAGTT ATTGTGCTGG TATCGACACT TTAATGATTC TCCTCCCATC GTATTAGTAC ACGGAGAGGT AGAGGCGCAA AAGGTGTTAC TAGCTCAACT TAATGCAAAT AGCAGCTTAG CTCCTAGACA AAGTGCGATA GCAGAGCAAG GTAATTGCCT GGATCTTAGT CGGCTGCCTA AATTTGTTTG GTTACCGAGC GCTCTTGGCA ATGGGAAGCA AGATGAGTGA
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Protein sequence | MQMTLSFLGA TQEVTGSCHL LTIDGRQVLL DCGLIQGSKA DVLRNHEPFA FTPSQIHAVV LSHAHIDHSG RLPLLVKSGF TGPIYSHKAT VELCGVMLKD AAMLQARDTE RLNKKRAKND LPLLDPLFDE ADVERVMLQF VALDYGENKE VAPHLKVCLS DAGHILGSAV VELWLGEGSE TKKLVFSGDL GREGMPILDD PTFIDSADLV LMESTYGDRL HRSWDDTLEE LRAIFARTIE QSRGNILLPA FSVGRAQELL YLFHLYAKEW DLSRWRICLD SPMAIKATQI YVDNYGLMDE DFKRFTHMSP GKHPLLSNVD FIDTTEESME LNHIHQGLII IAGSGMCNGG RIRCHLEHNL ANSFSDVIIC GYQAHGTPGR LLVDGAESLT ISGQSINVAA RLHTVGGLSA HADQAELLCW YRHFNDSPPI VLVHGEVEAQ KVLLAQLNAN SSLAPRQSAI AEQGNCLDLS RLPKFVWLPS ALGNGKQDE
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