Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3205 |
Symbol | |
ID | 5663594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3929626 |
End bp | 3930231 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641237864 |
Product | GDSL family lipase |
Protein accession | YP_001503056 |
Protein GI | 157963022 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0765552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACT TGTCGATACT GAGGCCATTT GGCCGATCTC TCATCATACT GTCATTGCTG TTATTGCAAG CTTGCTCTGG TGCCAGTATT CCAGTCTTGT CCGAAAACGC GCGGGTGCTA GCCTTTGGTG ATAGCCTGAC CTATGGCGTC GGTGCGAGTA AGGGCCAAGA TTACCCGAGT CAACTTGCAG GGATAAGCGG CTTTGAGGTG ATTAATGCCG GGGTGTCAGG AGAGACTACA TCGGGTGGTA AGAAACGCTT AGCTCAGCTA TTGGCTCATC ATGATCCTGA GTTGTTAATT TTATTAGAGG GCGGGAATGA CTTTCTTCGT AATCAGCCAT TGGCAACGAC CAAAGCTAAC TTAGCGCAGA TGATCGAGAT AGCACAGGCT AAGCAGATCC CGGTTCTGCT GGTGGCCGTG CCGCAAAAGA GCTTATTCCT GTCACCATCG CCTATTTATG CGGAATTAGC CGAGCAATAT GAGCTGGTTT TAGTAGAAGA TACCTTGAGT AGCCTATTGA GAACTCCGAG TAAAAAGTCT GATGCCATAC ATCTAAACGA CGAGGGCTAC ACAGCGCTGG CTGAGGCGAT TTATCAGGCG ATATAA
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Protein sequence | MKHLSILRPF GRSLIILSLL LLQACSGASI PVLSENARVL AFGDSLTYGV GASKGQDYPS QLAGISGFEV INAGVSGETT SGGKKRLAQL LAHHDPELLI LLEGGNDFLR NQPLATTKAN LAQMIEIAQA KQIPVLLVAV PQKSLFLSPS PIYAELAEQY ELVLVEDTLS SLLRTPSKKS DAIHLNDEGY TALAEAIYQA I
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