Gene Spea_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3205 
Symbol 
ID5663594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3929626 
End bp3930231 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content49% 
IMG OID641237864 
ProductGDSL family lipase 
Protein accessionYP_001503056 
Protein GI157963022 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0765552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT TGTCGATACT GAGGCCATTT GGCCGATCTC TCATCATACT GTCATTGCTG 
TTATTGCAAG CTTGCTCTGG TGCCAGTATT CCAGTCTTGT CCGAAAACGC GCGGGTGCTA 
GCCTTTGGTG ATAGCCTGAC CTATGGCGTC GGTGCGAGTA AGGGCCAAGA TTACCCGAGT 
CAACTTGCAG GGATAAGCGG CTTTGAGGTG ATTAATGCCG GGGTGTCAGG AGAGACTACA 
TCGGGTGGTA AGAAACGCTT AGCTCAGCTA TTGGCTCATC ATGATCCTGA GTTGTTAATT 
TTATTAGAGG GCGGGAATGA CTTTCTTCGT AATCAGCCAT TGGCAACGAC CAAAGCTAAC 
TTAGCGCAGA TGATCGAGAT AGCACAGGCT AAGCAGATCC CGGTTCTGCT GGTGGCCGTG 
CCGCAAAAGA GCTTATTCCT GTCACCATCG CCTATTTATG CGGAATTAGC CGAGCAATAT 
GAGCTGGTTT TAGTAGAAGA TACCTTGAGT AGCCTATTGA GAACTCCGAG TAAAAAGTCT 
GATGCCATAC ATCTAAACGA CGAGGGCTAC ACAGCGCTGG CTGAGGCGAT TTATCAGGCG 
ATATAA
 
Protein sequence
MKHLSILRPF GRSLIILSLL LLQACSGASI PVLSENARVL AFGDSLTYGV GASKGQDYPS 
QLAGISGFEV INAGVSGETT SGGKKRLAQL LAHHDPELLI LLEGGNDFLR NQPLATTKAN 
LAQMIEIAQA KQIPVLLVAV PQKSLFLSPS PIYAELAEQY ELVLVEDTLS SLLRTPSKKS 
DAIHLNDEGY TALAEAIYQA I