| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3167 |
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| Symbol | |
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| ID | 5663556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3878809 |
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| End bp | 3879615 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237825 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001503018 |
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| Protein GI | 157962984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0598273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TCTTAACAAT AACTTTAAAA GAATCGAATT CAAGTATGCA TAAAATTGCC
AAAAGTGTCG CTGTAGTCCT TATCACACTT GCAGCTACGG CCTGTAGTAG TAAACAGGGC
GAAGACCCTG CGATGACAAA GAGCTCTCCA GAAGTGCTCT ATTCTCAAGC AAGAACCTCT
ATGGAACTAG GTAATTACAG CAAAGCTGTC CGCTCTCTAG AAGCCTTGGA TTCACGCTTC
CCATTTGGTC CACATAAGAC TCAAGTTCAA CTTGATCTTA TTTATGCCTA TTACAAACTT
GACGATCCTG CGTCAGGTAT TGCGAATATC GATCGTTTTA TTCGCTTAAA CCCAACTCAT
AAAGATATTG ATTATGTTTA TTACATGCGC GGCTTAGTCA ATATGCAGTC TGACCGATAC
CTGTTTCACG ATATGCTAAA TATCGATCGT TCTGACCGCG ATCCAAAGGC TGCGCAAGAT
GCATTCAACG ATTTCGATAG ACTAATTAAG TCATATCCAA ACAGTAAGTA TGCAGCAGAT
GCACAAAAAC GCATGCAGCA CCTAAAAAAT AGACTGGCAC TTTACTCGAT CAAGGTAGCC
GAATACTACA TAAAAATGAA TGCATGGAGT GCTGCCGCGA TCCGCGCGCA GTCAGTTTTA
GAGACCTATC CAGGTACACC ATCAACTGAA AAAGCATTAG AGATCATGTC TACGGCCTAT
GGTGAACTAG GCCAAGAAAA GCTTAAAGAT CATGTACTCA TGGTAATGAA GGCTAACTAT
CCTAATAATA AATTAGTGAC TAAATAA
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| Protein sequence | MEKFLTITLK ESNSSMHKIA KSVAVVLITL AATACSSKQG EDPAMTKSSP EVLYSQARTS
MELGNYSKAV RSLEALDSRF PFGPHKTQVQ LDLIYAYYKL DDPASGIANI DRFIRLNPTH
KDIDYVYYMR GLVNMQSDRY LFHDMLNIDR SDRDPKAAQD AFNDFDRLIK SYPNSKYAAD
AQKRMQHLKN RLALYSIKVA EYYIKMNAWS AAAIRAQSVL ETYPGTPSTE KALEIMSTAY
GELGQEKLKD HVLMVMKANY PNNKLVTK
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