| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3164 |
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| Symbol | |
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| ID | 5663553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3874215 |
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| End bp | 3876788 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237822 |
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| Product | ATPase |
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| Protein accession | YP_001503015 |
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| Protein GI | 157962981 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.311114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTC CAAATTGCCA TCTCGGATGC TCAGTCATTG
GCACTAGGCC GAGATCATCA ATTTATCGAA CCATCACATT TGATGATGGC GTTACTGAAT
CAAGATGGTG GTTCAATTCA CCCTCTACTC ACGCAAGCAG GGATCCAAGT AAGTACTCTG
CGCTCGTTAT TGAGTAAAGA TCTAGAACAA AGACCTCAAG TCGAAGGGAC TGGCGGGGAT
GTACAGCTAT CTCAGGCATT GATTCGCCTA CTCAATTTAT GCGATAAGCT GGCGCAAAAG
CGTAAAGACA AGTTTATCTC TAGTGAGCTG TTTGTATTAG CGGCGCTAGA GGGGAATGAC
AGCCTAGCGC AAGCACTAAA ACAATCCGGT GCGACTAAAG AGTTGATGGA GTCGACTATA
GACCAAATTC GTAACGGACA AAATGTGGAC GACCCTAATG CTGAAGATCA GCGTCAAGCA
CTTAAGAAGT TTACCGTCGA TCTTACCGAG CGAGCAGAGC AGGGGAAATT AGACCCAGTT
ATTGGTCGTG ACGATGAAAT TCGCCGTACC ATTCAAGTGT TGCAGCGCCG TAGCAAGAAC
AATCCTGTAT TGATCGGAGA GCCGGGTGTC GGTAAAACGG CGATTGTTGA AGGCTTAGCG
CAGCGGATCA TTAACAACGA AGTCCCCGAA GGCATCAAGA ATAAGCGTGT ATTGTCATTG
GACATGGGCG CATTAGTGGC AGGTGCTAAG TATCGCGGTG AATTTGAGGA GCGTTTAAAA
GCGGTGCTCA ATGAGTTGTC TCAAGAGGAG GGCCAAGTGA TCCTCTTTAT TGATGAACTA
CACACTATGG TAGGTGCGGG TAAGTCTGAT GGCGCGATGG ATGCGGGCAA TATGTTAAAG
CCTGCGCTGG CACGCGGTGA TCTACACTGC GTGGGCGCAA CAACATTGGA TGAATATCGT
CAGTACATTG AAAAAGATGC AGCGCTTGAG CGTCGTTTCC AGAAAGTGCT GGTAGATGAG
CCGAGTGTTG AAGACACTAT CGCTATCTTA CGTGGTCTGA AAGAGCGCTA TGAGCTGCAT
CATCACGTTG AAATTACCGA TCCGGCGATT GTTGCTGCGG CAAGTATGTC ACATCGCTAT
ATCTCAGATC GTAAGTTGCC AGATAAAGCT ATCGATCTGA TTGACGAGGC TGCATCGAGC
ATCCGTATTC AGATTGACTC TAAGCCGGAA TCTTTAGATA GATTGGAACG ACGTGCTATT
CAGCTAAAGC TTGAAGAGCA AGCGTTAAGT AAAGAAGCTG ATGAAGCCAG CTTACGCCGT
TTAGACACAT TGCGTGCTGA GCTTAAAGAT GTTGAAGCGA AAGGGGCTGA GCTAAATGAG
ATTTGGCATA CCGAGAAAGC AGCGTTAGCT GGTACTCAGC ATATAAAAGC TGATTTAGAG
CAAGCACGTA TGGATCTTGA AGTGGCTAGA CGTGCGGGTG ACTTAACTCG TATGTCAGAG
CTGCAGTATG GACGTATTCC AGAGCTTGAA AAGCAGCTAG ATTTAGCGGC GCAAGCTGAA
ATGCAAGATA TGACCTTATT GCGGAATAAG GTTACCGATG TTGAGATTGC CGAAGTTTTA
TCAAAGGCTA CAGGTATTCC GGTATCTAAG ATGCTCGAAG GGGAACGTGA CAAGCTGCTT
AAGATGGAAG ATGCGCTGCA CGAACGAGTT ATCGGCCAAA ACGAAGCAGT AGATTCTGTG
TCTAATGCAA TTCGTCGTAG CCGAGCTGGT CTTGCAGATC CGAATCGTCC AATTGGCTCT
TTTTTATTCT TAGGTCCAAC AGGCGTTGGT AAAACTGAGC TATGTAAGTC GCTTGCTAAA
TTCTTGTTCG ATACCGAATC TGCACTCGTT CGAGTCGACA TGTCTGAGTT TATGGAAAAA
CATTCGGTTT CACGATTAGT TGGTGCCCCT CCAGGATATG TGGGTTATGA AGAGGGCGGC
TACTTAACGG AAGCTGTGAG ACGTAAACCA TATTCGGTGA TCCTACTTGA TGAAGTTGAG
AAGGCGCATC CAGATGTCTT TAATATCTTA CTGCAAGTAT TAGATGATGG ACGCCTAACC
GATGGACAAG GGCGCACGGT AGACTTTAGA AATACAGTGG TGATCATGAC CTCTAATCTA
GGTTCAGATC TCATCCAATT GGGCTTTGGT ACTCAAAGCT ATGATGAGAT GAAGTCTGAT
GTGATGCAGG TGGTGATGCA GAACTTCAGA CCTGAGTTTT TGAACCGTGT CGATGAGGCG
GTAGTGTTCC ATCCACTTGA TGAGAAGAAT ATTGCCCATA TTGCCAAGAT CCAAATTGAA
GGCCTTAAAA AACGCCTTGC AGACAAGGAT TATGGACTTG AGATGAGTGA TGACGCTCTA
GCATTGATTG CTCGAGCGGG TTTTGATCCT GTATATGGTG CAAGACCACT TAAGAGAGCA
TTGCAGCAAG AGGTTGAAAA TCCATTGGCA CAGCAGATCC TCAGTGGTCA GCTCTTGCCT
GGCAAGGATA TTAAGGTTTC AGTTGAAAAC GACACCTTAG TGTTTAGCCA ATAA
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| Protein sequence | MRLDRMTNKF QIAISDAQSL ALGRDHQFIE PSHLMMALLN QDGGSIHPLL TQAGIQVSTL
RSLLSKDLEQ RPQVEGTGGD VQLSQALIRL LNLCDKLAQK RKDKFISSEL FVLAALEGND
SLAQALKQSG ATKELMESTI DQIRNGQNVD DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIINNEVPE GIKNKRVLSL
DMGALVAGAK YRGEFEERLK AVLNELSQEE GQVILFIDEL HTMVGAGKSD GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH
HHVEITDPAI VAAASMSHRY ISDRKLPDKA IDLIDEAASS IRIQIDSKPE SLDRLERRAI
QLKLEEQALS KEADEASLRR LDTLRAELKD VEAKGAELNE IWHTEKAALA GTQHIKADLE
QARMDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLAAQAE MQDMTLLRNK VTDVEIAEVL
SKATGIPVSK MLEGERDKLL KMEDALHERV IGQNEAVDSV SNAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTESALV RVDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDLIQLGFG TQSYDEMKSD VMQVVMQNFR PEFLNRVDEA VVFHPLDEKN IAHIAKIQIE
GLKKRLADKD YGLEMSDDAL ALIARAGFDP VYGARPLKRA LQQEVENPLA QQILSGQLLP
GKDIKVSVEN DTLVFSQ
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