Gene Spea_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3152 
Symbol 
ID5663541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3857653 
End bp3858435 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content47% 
IMG OID641237805 
Productrare lipoprotein A 
Protein accessionYP_001503003 
Protein GI157962969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.93074e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCA ATAATACTCT CGCCATCTTG CTTTTAACTG CCACCCTAGC CGCATGTTCT 
AGTGGTGGTC GCTACGAACT TGATGACGAT AAAGCGCCGA CTTCAGCCCC TGATGTAACA
AAAGTTGAAG ATGCTCATCC CAAATATGAG CCCTACAGTC GTGGCGGCAA CAAAAAAAAT
TACACCGTAT TAGGCAAAAG CTATCAAGTT ATGGATACAG GTGAAGGTTA TGCCGACAAG
GGCATCGCCT CATGGTATGG GGCTAAGTTT CATGGCCACC TGACCTCTAA CGGTGAAACC
TATGACATGT ACTCCATGTC TGCAGCCCAT AAGACACTGC CGCTACCTAG CTATGTAAAG
GTGACTAACC TAAAGAACAA CAAGACGGTT ATCGTTCGCG TAAATGACAG AGGCCCGTTC
CATGCCGATA GAATTATTGA CCTCTCTTAC GCTGCGGCTC ACCGTCTAGA CATGCTAAAA
ACGGGTACAG CAAATGTCAG TTTAGAAGTC ATCTATATTG CCGATCCTGA GTCTAGCGCG
CTTGCCGAAT TAAAAGGCAC AGAGCTGCAC TATATTCAGG TGGTTGCCTC ATCTAGCAAA
GAACGCTTAG ACAGCCTAGC GAGTGCTTTA GAGCAAAAAT ATCAGGTTAA AAGCCGGGTG
CAGAGTGCCA ATAACCTCTA CAGACTTCAG CTCGGTCCAA TAGGCCAGCA GCAGCTTGCA
ACTAAGCTAA CCGAGAAGCT GAAACAAGAG GGGTACCCGC AAAGTTACCT GCTTACAGAA
TGA
 
Protein sequence
MPRNNTLAIL LLTATLAACS SGGRYELDDD KAPTSAPDVT KVEDAHPKYE PYSRGGNKKN 
YTVLGKSYQV MDTGEGYADK GIASWYGAKF HGHLTSNGET YDMYSMSAAH KTLPLPSYVK
VTNLKNNKTV IVRVNDRGPF HADRIIDLSY AAAHRLDMLK TGTANVSLEV IYIADPESSA
LAELKGTELH YIQVVASSSK ERLDSLASAL EQKYQVKSRV QSANNLYRLQ LGPIGQQQLA
TKLTEKLKQE GYPQSYLLTE