Gene Spea_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3151 
Symbol 
ID5663540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3856668 
End bp3857666 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content44% 
IMG OID641237804 
Productlytic murein transglycosylase B 
Protein accessionYP_001503002 
Protein GI157962968 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.09427e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAT TAAAACGCAT GCTTGCCCCT TTGGCATTAA CCTTGTTTTC ATGCTCAGCT 
GCAGCAGCAC CTTCAGACTC TGAAGTCGAA GCACTAAAAG CCGAATTTAT CAAAACCCAG
AGTGGCAAGG GGTTTGATGC CGAAGACACC ACTATTTTCA TCAAAAATGC AAAGTATAAC
CAAGCCGTTA TCGATGCCAT GACCAAGCCT TGGGAAGCCA AACCTTGGCA TCAGTATTAT
CCAATATTCT TAACTGAAAA GCGTCTAGAT GCGGGTCTTG CCTTCTGGAA AGAGCACGCA
AAAACTATCG AACGAGCATC AAAAGAGTTT AATGTCGATC CACAGATTAT TGTGGCCATT
ATCGGCATCG AAACTTTTTA TGGTGGTTAC ATGGGTAATT ACCCTGTTAA AGACGCACTC
TATACCTTAG GTTTCCATTA TCCACCACGC GCCACCTTTT TTAGAAGTGA ATTCGCAAAT
CTGCAGTCGC TAGTAAAAGA AGAGCGCTTA GATATCAATA GCCTCAAAGG CTCCTACGCA
GGCGCAATGG GCTTTGGTCA GTTTATACCG TCAAGCTACC GCCATTACGC GGTCGATTTT
GATAATGACG GCAGCCGCGA TCTACTTATC AGCACCACAG ATGCCATTGG TAGTGTGGCT
AACTATTTTC ATCAGCATGG TTGGCAAAAA AACCAGCCAG TAACTCTTCA ATTAACCTTG
AATAAAGACT TACCTGATAC AGTCAAAACC TGGTCTGGGG AGAAACTGCA TTATCAGGTT
GCCGATATCC TATCGCCAAA TGTCGCACTT GCTGAATCAA TAGATCTCGA CGTATCGCAA
CCGGCTCTAG TGGTTAAACT CGAGCAAGCC GAACATGATG AGTATTGGCT AGGCCTTAAA
AACTTTTATG TTATCACCCG TTACAACCGC AGCCCTCTGT ATGCCATGGC CGTGTACCAG
TTTAGCCAGG AATTAAAGAA AGCCTATGCC ACGCAATAA
 
Protein sequence
MTLLKRMLAP LALTLFSCSA AAAPSDSEVE ALKAEFIKTQ SGKGFDAEDT TIFIKNAKYN 
QAVIDAMTKP WEAKPWHQYY PIFLTEKRLD AGLAFWKEHA KTIERASKEF NVDPQIIVAI
IGIETFYGGY MGNYPVKDAL YTLGFHYPPR ATFFRSEFAN LQSLVKEERL DINSLKGSYA
GAMGFGQFIP SSYRHYAVDF DNDGSRDLLI STTDAIGSVA NYFHQHGWQK NQPVTLQLTL
NKDLPDTVKT WSGEKLHYQV ADILSPNVAL AESIDLDVSQ PALVVKLEQA EHDEYWLGLK
NFYVITRYNR SPLYAMAVYQ FSQELKKAYA TQ