| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3143 |
|---|
| Symbol | leuS |
|---|
| ID | 5663532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3847810 |
|---|
| End bp | 3850416 |
|---|
| Gene Length | 2607 bp |
|---|
| Protein Length | 868 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237796 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001502994 |
|---|
| Protein GI | 157962960 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0606298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGCA TAGCCGGAAA TAGATTGATG CAAGAGCAAT ATACTCCTTC AGAAATTGAA
GCTAAAGTGC AGCAGCACTG GCAAGACACA AAAACATTTG AAGTCACCGA AGACGAAAAC
AAAGAAAAGT TTTACTGCCT TTCTATGTTC CCGTACCCAT CGGGCCGACT GCACATGGGT
CACGTACGTA ACTACACCAT AGGCGATGTT GTGTCTCGTT ACCAACGTCT GCAAGGTAAA
AACGTGCTTC AACCTATTGG TTGGGACTCT TTCGGTCTTC CAGCTGAAAA CGCGGCTATC
AAAAACAACA CCGCGCCTGC ACCTTGGACT TACGAAAATA TCGATTACAT GAAAAACCAG
CTAAAAATGC TAGGTTTTGG TTATGACTGG TCACGTGAAA TCGCTACTTG TACCCCTGAA
TACTACCGCT GGGAACAGTG GTTCTTCACT AAGCTTTATG AAAAAGGCCT AGTGTACAAG
AAGACCTCAT CAGTTAACTG GTGTCCAAAC GATGAAACCG TACTTGCAAA CGAGCAGGTT
ATCGACGGTT GCTGCTGGCG CTGTGATACC ACTGTGGAGC AAAAAGAGAT CCCACAGTGG
TTTATCAAGA TCACTGAGTA CGCGGAAGAG CTACTTAACG ACATCGATAC GCTAGAAGAG
TGGCCTGAGC AAGTTAAGAC CATGCAGCGT AACTGGATTG GTCGTAGTGA AGGTATTGAG
ATGACGTTCC AGGTTGCAGG CAGCGACCAG AGCTTTGATA TCTACACCAC TCGTCCTGAT
ACAGTAATGG GCGTGACTTA TGTTGCTATT GCAGCTGGTC ACCCATTAGC TGAGCAAGCA
GCTATCAATA ACCCAGCTTT AGTTGAGTTT ATTGAAGAGT GTAAAAACGC TGATACCACT
GAAGCTGCTA TGGCTGCAAT GGAAAAGAAA GGTGTTGCTA CAGGTCTTAA TGCTATCCAC
CCAATCACTG GCAAAGAAGT GCCAATCTGG GTAGGTAACT TCGTACTGAT GAACTACGGT
ACTGGCGCCG TAATGTCTGT TCCTGCTCAC GATCAACGTG ACTACGAGTT CGCCAAGAAG
TACGGCCTAA ACATCGAAGC CGTTATTAAG CCTGTTGACG GAGAAGTCGA CATTAGCGAA
GAAGCATACA CTGAGAAAGG TGTACTGTTT AACTCTGCTG AGTTTGATGG GCTAGATTTC
CAAGCGGCGT TTGATGCAAT TGATGCCAAG TTAACTGCTG AAGGTAAAGG TAAGCGACAA
GTTAACTTCC GTCTACGTGA CTGGGGTGTT TCACGTCAGC GTTACTGGGG TGCACCAATT
CCAATGGTGA CTTTGGCCGA TGGCACAGTA ATGCCAACAC CAGAAGATCA ACTACCCGTA
ATATTGCCTG AAGATGTGGT TATGGATGGC ATCCAAAGCC CAATCAAATC AGATAAAGAG
TGGGCTAAGA CCACTATTAA CGGCCAAGAA GCATTCCGTG AAACCGATAC CTTCGATACC
TTTATGGAAT CATCTTGGTA CTACGCGCGT TACTGTAGCC CGCATGCTGA TGAAATGCTT
GATCCAGCAA AAGCTAACTA CTGGTTGCCA GTGGATCAAT ACATTGGTGG TATCGAGCAT
GCTTGTATGC ACCTATTGTA CTTCCGCTTC TTCCACAAGT TGCTGCGTGA CACAGGCCTA
GTGAACTCTA ACGAGCCAGC TAAGCGTCTA CTGACTCAAG GTATGGTACT GGCTGATGCT
TATTACTATA ACAATGAGAA AGGTGCACGC GTTTGGGTTG CACCATCTGA TGTAACAGTA
CAAGAGACAG ACGACAAAGG CCGTACCGTT AAAGCGGTAG ACAGCGAAGG TCATGAACTG
GTTTACACCG GTATGAGCAA GATGTCTAAG TCTAAGAACA ACGGTATCGA CCCACAAGAG
ATGGTTGATA AGTACGGCGC TGATACTGTG CGTCTATTTA TGATGTTCGC AGCGCCACCA
GAGCTAACTC TTGAATGGCA AGAGTCTAGT GTTGAAGGTG CACACCGCTT TATTAAGCGT
TTGTGGAAAA CAGCACACGA CCATATTGCT AACGGCACAA CTGCTGAGCT TGATGTTAAG
TCACTAAATG CTGCTCAAAA AGAGCTACGT CGTGAACTTC ATAAGACGAT TGCAAAAGTC
GGTGATGATA TCGAACGTCG TCAGATGTTC AACACCGCTA TCGCATCGAT TATGGAATTG
ATGAACCGTC TACAGAAGGC ACCATCAGAA ACGGATCAAG ACAAGGCACT AATGCAAGAA
GCCTTGAATG CAGTTATCCG CTTGCTTTAT CCAATTATTC CACACACTTG TTTTGTGCTA
TGGAATGAGC TTGGTAACCA AGGGGCAATT GAAGAGGTAC TTTGGCCAGA AGTTGACGAG
TCAGCACTAG TTGAAGATAG CAAGCTAATC ATCGTTCAAG TTAACGGTAA ATTGCGCGCT
AAGATCACAG TTGCTGCAGA TGCTAGCAAA GAAGAAGTTG AAGCTGCGGG TATGGCCGAA
GAAGGCGTGG TTAAGCACAC CGAAGACAAA ACCGTTCGCA AGGTTATCTA CGTACCGGGC
AAGCTGCTCA ATATCGTAGC TAACTAA
|
|---|
| Protein sequence | MGGIAGNRLM QEQYTPSEIE AKVQQHWQDT KTFEVTEDEN KEKFYCLSMF PYPSGRLHMG
HVRNYTIGDV VSRYQRLQGK NVLQPIGWDS FGLPAENAAI KNNTAPAPWT YENIDYMKNQ
LKMLGFGYDW SREIATCTPE YYRWEQWFFT KLYEKGLVYK KTSSVNWCPN DETVLANEQV
IDGCCWRCDT TVEQKEIPQW FIKITEYAEE LLNDIDTLEE WPEQVKTMQR NWIGRSEGIE
MTFQVAGSDQ SFDIYTTRPD TVMGVTYVAI AAGHPLAEQA AINNPALVEF IEECKNADTT
EAAMAAMEKK GVATGLNAIH PITGKEVPIW VGNFVLMNYG TGAVMSVPAH DQRDYEFAKK
YGLNIEAVIK PVDGEVDISE EAYTEKGVLF NSAEFDGLDF QAAFDAIDAK LTAEGKGKRQ
VNFRLRDWGV SRQRYWGAPI PMVTLADGTV MPTPEDQLPV ILPEDVVMDG IQSPIKSDKE
WAKTTINGQE AFRETDTFDT FMESSWYYAR YCSPHADEML DPAKANYWLP VDQYIGGIEH
ACMHLLYFRF FHKLLRDTGL VNSNEPAKRL LTQGMVLADA YYYNNEKGAR VWVAPSDVTV
QETDDKGRTV KAVDSEGHEL VYTGMSKMSK SKNNGIDPQE MVDKYGADTV RLFMMFAAPP
ELTLEWQESS VEGAHRFIKR LWKTAHDHIA NGTTAELDVK SLNAAQKELR RELHKTIAKV
GDDIERRQMF NTAIASIMEL MNRLQKAPSE TDQDKALMQE ALNAVIRLLY PIIPHTCFVL
WNELGNQGAI EEVLWPEVDE SALVEDSKLI IVQVNGKLRA KITVAADASK EEVEAAGMAE
EGVVKHTEDK TVRKVIYVPG KLLNIVAN
|
|---|
| |