Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3137 |
Symbol | |
ID | 5663526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3841468 |
End bp | 3842895 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237790 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001502988 |
Protein GI | 157962954 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.21345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA AACTCCATAT TAAAACTTGG GGCTGTCAAA TGAATGAGTA TGACTCATCT AAGATGGCTG ATCTTCTTGA CGAATACGAA GGTTACACAT TAACAGACAA TGCTGAAGAA GCTGACGTGC TGCTTTTAAA TACCTGCTCT ATTCGTGAGA AAGCACAGGA GAAAGTGTTT CATCAGCTAG GGCGCTGGAA AACATTAAAA GATAAAAAAC CTGGGCTGAT TATCGGCGTT GGTGGTTGTG TTGCCTCACA AGAAGGTAAG GCTATTAAGG AACGTGCTCA GTGCGTAGAC CTTATTTTTG GCCCGCAAAC CTTACATCGT TTACCTGAAA TGATCGATCA GATCAAAGAC GGTAAAAAAG CGGTTATCGA CGTGAGCTTC CCAGAAGTTG AGAAGTTTGA CCGTCTTCCG GAACCGCGGG CCGAAGGTCC AAGTGCTTTC GTATCAATTA TGGAAGGCTG TAGCAAATAC TGCTCTTTCT GTGTGGTGCC TTACACTCGT GGTGAAGAAG TTAGCCGTCC ATTGGACGAT GTGATTCTTG AAATCGCCCA ACTCGCAGAG CAAGGCGTGC GTGAAGTTAA TCTACTTGGC CAAAACGTAA ACGCTTATCG TGGTGCAACC CACGATGATG AGATCTGTAC TTTTGCAGAA CTTTTACGTT ACGTAGCTGC AATTGATGGT ATTGACCGTT TACGCTTTAC CACCAGCCAC CCAATTGAGT TTACGCAAGA TATTATTGAT GTGTATGAAG ACACACCAGA GCTTGTAAGC TTCTTACACT TACCAGTGCA ATCAGGTTCA GACTTGATCC TAACGCAAAT GAAACGTGGA CACATGGCAA TCGAATATAA GTCGATTATC CGCCGTTTAC GTAAAGCTCG TCCAGATATC CTAATCAGCT CTGATTTCAT CATCGGCTTC CCAGGTGAAT CTAAGCAAGA CTTCGCTGAT ACCATGAAGT TGATTGAAGA CATACAGTTT GACCATAGCT TTAGCTTTAT CTACAGCGCA CGCCCAGGAA CCCCAGCTGC GGATCTTCCA GATAATGTTA GTCTTGATGA GAAAAAAGAG CGTCTTGCTA TCTTGCAAGA CCGTATCACT CAACAAGCTA TGCGTTATAG CCGTCAAATG GTCGGAACTG TACAACGCAT CTTAGTTGAA GGCCCATCGG TTAAGAACCC AATGGAGCTT CGCGGCCGTA CTGAAAACAG TCGTGTGGTA AACTTTGAAG GCCTGCATGA ACATATCGGT AAGTTTGTCG ACGTAGAGAT TGTTGACGTA TATACCAACT CTCTTCGCGG CGTGTTTATC CGCGGTGAAG ATGAAATGGA CTTGCGTCGT GATTTACGTC CATCTGACAT CACTGCAAAA TATAAGCAAG CTGATGACTT AGGTGTGACC TTGTTTACCC CGGCTTAA
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Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLDEYE GYTLTDNAEE ADVLLLNTCS IREKAQEKVF HQLGRWKTLK DKKPGLIIGV GGCVASQEGK AIKERAQCVD LIFGPQTLHR LPEMIDQIKD GKKAVIDVSF PEVEKFDRLP EPRAEGPSAF VSIMEGCSKY CSFCVVPYTR GEEVSRPLDD VILEIAQLAE QGVREVNLLG QNVNAYRGAT HDDEICTFAE LLRYVAAIDG IDRLRFTTSH PIEFTQDIID VYEDTPELVS FLHLPVQSGS DLILTQMKRG HMAIEYKSII RRLRKARPDI LISSDFIIGF PGESKQDFAD TMKLIEDIQF DHSFSFIYSA RPGTPAADLP DNVSLDEKKE RLAILQDRIT QQAMRYSRQM VGTVQRILVE GPSVKNPMEL RGRTENSRVV NFEGLHEHIG KFVDVEIVDV YTNSLRGVFI RGEDEMDLRR DLRPSDITAK YKQADDLGVT LFTPA
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