Gene Spea_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3127 
SymbolhemA 
ID5663516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3830048 
End bp3831298 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content45% 
IMG OID641237767 
Productglutamyl-tRNA reductase 
Protein accessionYP_001502978 
Protein GI157962944 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.25636e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTG TAGCAATCGG AATTAACCAT AAAACGGCGA CGGTCGACCT GCGAGAAAAA 
GTCGCATTCG GTCCTGATAA AATTCATGAT GCCATGAAGA GTCTAGCTGC TAGCACTCAG
TCGGGCGAAG CCGTCATCAT TTCCACCTGT AACCGTACAG AACTTTACTG TAATAACTGT
GAAGCTGCTG ACGTAGTTGC TTGGCTGGAA GATTATCATC AACTATCTCA TGAAGATGTT
GAACCCTGCT TGTACCAATA TAAAGGTCAA GAAGCGGTTA AACATTTAAT GCGTGTATCT
GCTGGTCTCG ATTCACTGAT TTTGGGTGAA CCGCAAATTT TAGGTCAAGT GAAGCAATCT
TTTGTGAAAG CAAAAGAAGC GGGTACCGTT GCTGCGACAA TGGATCGTAT GTTTCAGAAT
ACCTTTTCAG TCGCCAAAAA AATTCGAACC GAGACTGAAA TTGGTGCAGC GGCCGTATCG
GTAGCCTTTG CAGCAGTGAG TATGGCAAAA CATATTTTCT CATCAATCAG TACGACTCAG
GTATTATTGG TCGGTGCCGG TGAGACAATT GAGCTGGTCG CGCGTCACTT AAAAGACAAT
GGCGTTACAA CCATGGTTGT TGCCAACCGA ACGATTTCAC GTGCAGAAGC CATGTGTGAA
GAGTTCGGCG CGACAGCAAT TACACTCGAA CAGATCCCAG ATTTTCTCCC TAAGGCCGAT
ATCGTGATAT CCTCTACGGC TAGCCCATTA CCAATTCTTG GTAAAGGCAT GGTAGAAAAA
GCGCTTAAGC AGCGTCGTCA TCAACCTATG TTATTGGTTG ATATAGCAGT TCCTCGAGAT
ATCGAGGCTG AAGTCGCGGA TTTAGATGAT GCATTCCTCT ATACCGTAGA TGACCTGCAA
AGCATTATTG AACAGAATAT GGCATCTCGA AGAGAAGCCG CCGAGCAAGC AGAATTAATT
GCAGAAGATC AAGCTTATCA ATTTATGGAA TGGATCCGCT CGCTAGAGTC GGTAGACAGT
ATCCGTGAAT ATCGCACAAA AAGTATGGCG ATTAAAGATG AGCTGGTAGA GCGAGCGGTC
AACAAATTGG CCCAAGGTGG TAATAGTGAG CAGGTCTTAC TAGAACTAGC TAATAAGCTT
ACCAATAAAC TGATCCATGC GCCGACACAA GCGCTTACCG CTGCGAGTCG ACAAGGGGAC
TTGAATTCCC TTGGACAATT AAGAGCTTTG CTTGGACTAG ATAAAGACTA A
 
Protein sequence
MSLVAIGINH KTATVDLREK VAFGPDKIHD AMKSLAASTQ SGEAVIISTC NRTELYCNNC 
EAADVVAWLE DYHQLSHEDV EPCLYQYKGQ EAVKHLMRVS AGLDSLILGE PQILGQVKQS
FVKAKEAGTV AATMDRMFQN TFSVAKKIRT ETEIGAAAVS VAFAAVSMAK HIFSSISTTQ
VLLVGAGETI ELVARHLKDN GVTTMVVANR TISRAEAMCE EFGATAITLE QIPDFLPKAD
IVISSTASPL PILGKGMVEK ALKQRRHQPM LLVDIAVPRD IEAEVADLDD AFLYTVDDLQ
SIIEQNMASR REAAEQAELI AEDQAYQFME WIRSLESVDS IREYRTKSMA IKDELVERAV
NKLAQGGNSE QVLLELANKL TNKLIHAPTQ ALTAASRQGD LNSLGQLRAL LGLDKD