| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3075 |
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| Symbol | |
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| ID | 5663465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3772911 |
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| End bp | 3774056 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237716 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001502927 |
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| Protein GI | 157962893 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0335125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACAAAGT CTGCCTTACT CGTACTTGAA GATGGAACCA TTTTTTCTGG CACTGCAATT
GGTGCTGAAG GGATGTCTGT TGGTGAAGTC GTTTTTAACA CTTCAATGAC CGGTTACCAA
GAAATTTTGA CTGATCCATC ATATTCACGT CAAATTGTAA CCCTCACTTA TCCACATATT
GGTAATACTG GTACCAATGA TGAAGACACA GAATCTGATT CTGTTCATGC ATGTGGCCTT
ATCATTCGAG ACTTGCCGTT AATCGCAAGT AATTTTCGTA ATCAGCAATC TTTAAGCGAT
TATTTGGTCG CTAACAACGT TGTTGGTATT GCTGATATCG ATACTCGTAA ATTAACTCGT
ATCCTACGCG AGAAAGGCGC CCAAGCCGGT TGTATCATGG TTGGTGATTT AGATGAAGCT
AAAGCTTTAG CTGCAGCTAA AGCCTTCCCT GGTCTTAAAG GCATGGATTT AGCCAAAGAA
GTCACTACAA ACGAAACGTA CTCATGGCGC AGCGGTAGCT GGCGTTTAGT TGGCGGTTTG
CCGTCTGACA CGCCAGAAGC TGAGCTTAAG TATAAAGTGG TTGCCTACGA CTATGGTGTT
AAGCGCAACA TCTTACGTAT GTTGGTTGAC CGCGGTTGTG ATGTGACGGT TGTGCCTGCA
CAAACTCCTG CAGCCGAAGT GCTTGCAATG AATCCTGATG GGGTATTCCT GTCGAACGGT
CCTGGCGACC CAGAGCCATG TGATTACGCT ATTGCTGCAA TCCAAGAAAT CTTAAAAACA
GACATTCCTG TTTTCGGTAT CTGCTTGGGT CACCAGTTAT TAGCGTTAGC TTCAGGTGCT
AAAACACTGA AAATGAAGTT TGGTCATCAC GGTGCTAACC ACCCTGTAAG CAATATTGAG
CAAGGTAATG TGATGATCAC CAGCCAAAAC CATGGTTTTG CTGCTGATGA ATCAACGCTG
CCAGCCAACA TTAAAGTGAC TCACAAGTCT CTGTTTGATG GCTCTTTGCA AGGTATTCAT
CTTACAGATA AGCCAGCATT TAGTTTCCAA GGACACCCTG AAGCAAGTCC AGGACCAAAT
GATGCGGCGC CACTGTTTGA TCATTTCATT GATTTGATTG ACTTGTACCG CAAAAACGCC
AAGTAG
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| Protein sequence | MTKSALLVLE DGTIFSGTAI GAEGMSVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI
GNTGTNDEDT ESDSVHACGL IIRDLPLIAS NFRNQQSLSD YLVANNVVGI ADIDTRKLTR
ILREKGAQAG CIMVGDLDEA KALAAAKAFP GLKGMDLAKE VTTNETYSWR SGSWRLVGGL
PSDTPEAELK YKVVAYDYGV KRNILRMLVD RGCDVTVVPA QTPAAEVLAM NPDGVFLSNG
PGDPEPCDYA IAAIQEILKT DIPVFGICLG HQLLALASGA KTLKMKFGHH GANHPVSNIE
QGNVMITSQN HGFAADESTL PANIKVTHKS LFDGSLQGIH LTDKPAFSFQ GHPEASPGPN
DAAPLFDHFI DLIDLYRKNA K
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