Gene Spea_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3067 
Symbol 
ID5663457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3762018 
End bp3763970 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content47% 
IMG OID641237708 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_001502919 
Protein GI157962885 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.74852e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGACA TGGCAAAAAA TTTAATTCTC TGGGTTGTCA TCGCAGTTGT GCTGATGTCA 
GTTTTTCAGG GCTATTCCCC CTCTTCTTCT ACCAAGCAGA AGATGGATTA TTCAACCTTT
TTAGACGATG TTCGCTCAGG GCAGATTAAT ACTGTCGAAG TGAAAAGCGA TCAACGTACC
ATTGAAGGAA CAACCACTAC AGGCGAAAAG TTTGTCACCA TCATGCCTAT GCCAGATCTT
GATTTAATCA ATGATCTTGA CCGCAAGGGC ATCATGATGA AAGGACAAGA GGCGGAGGAG
TCAGGTTTCT TAACCCAGAT CTTTATCTCT TGGTTCCCTA TGCTACTGCT TATTGGTGTG
TGGATCTTCT TTATGCGCCA GATGCAAGGC GGTGGCGGTA AAGGCGCAAT GTCATTTGGT
AAGAGTAAAG CCAAATTGAT GAGCGAAGAC CAGATCAAGA CGACTTTTGG TGACGTTGCA
GGCTGTGACG AAGCTAAGGA AGACGTAAAA GAGCTAGTCG ATTACCTGAA AGAGCCTACA
AGATTCCAGA AATTGGGTGG CCGTATTCCT ACTGGTGTGC TGCTAGTTGG TCCTCCTGGT
ACAGGTAAAA CCTTGCTTGC TAAGGCGATT GCAGGTGAAG CTAAGGTGCC TTTCTTTACT
ATTTCAGGTT CTGATTTCGT TGAGATGTTC GTTGGTGTTG GTGCCTCACG TGTACGTGAC
ATGTTCGAGC AAGCGAAGAA GTCTGCACCG TGTATCATCT TTATCGATGA GATCGATGCC
GTAGGTCGTC AGCGTGGCGC GGGTGTAGGT GGTGGTCACG ATGAGCGTGA GCAAACACTT
AACCAGATGC TAGTTGAGAT GGATGGTTTC GAAGGTAACG AAGGTATTAT TGTTATCGCT
GCGACTAACC GTCCTGACGT ACTTGATGCT GCACTACTTC GTCCAGGTCG TTTCGACCGT
CAAGTGGTTG TAGGCTTACC AGATGTGCGT GGTCGTGAGC AAATCCTTAA AGTTCATATG
CGTAAAGTAC CTTTGGCTGA CGGCGTTAAA GCAAGCGTAA TTGCTCGTGG TACACCTGGC
TTCTCTGGTG CCGACCTTGC TAACCTTGTT AACGAAGCTG CACTGTTTGC TGCTCGTAAC
AGCCGCCGCG TAGTCGGTAT GGAAGAGTTC GAAAGCGCAA AAGATAAAAT CATGATGGGC
GCAGAGCGTC GCACCATGGT GATGTCGGAA GATGAGAAAG AGATGACCGC CTATCACGAA
GCGGGTCATG CTATCGTTGG TTGTTTAGTG CCTGAGCATG ATCCTGTGCA TAAGGTGACT
ATTATTCCAC GTGGCCGTGC ACTGGGTGTA ACCTTCTTCC TACCGGAAGC AGATGCAATT
AGTCAGAGCC GTCGCAAACT TGAGAGTCAG ATCTCGGTTG CTTACGGTGG ACGTATTGCA
GAAGATATTA TCTACGGTAG CGAGAAAGTT TCTACAGGTG CTTCGCAAGA CATTAAGTAC
GCAACATCTA TCGCACGTAA CATGGTGACT CAATGGGGCT TCTCTGAGAA GCTTGGTCCT
GTGCTTTATG CTGAAGATGA AAATGAAGTG TTCTTAGGTC GTAGCATGGG TAAATCTCAG
CATATGTCTG ATGACACTGC TCGCGTTATC GATGCCGAAG TTAAGCTGCT TATCGACGCA
AACTACGGAC GTGCCCATAC TTTCTTAACT GAAAATATGG ATATTCTTCA TGCGATGAAA
GATGCTTTGA TGAAGTATGA AACTATTGAT TCAGAGCAAA TTGCTGACTT GATGGCGCGT
CGTGAAGTGC GTATGCCTGC TGAATGGCAA AAAGATCTGC AGTCTAAGGA CAACGACAAC
AACGACACTT CTTCTGAAAA GAAAGAAGAT ATCAAGGAAG TTGAAGAAGA GAAGCCCGAT
GTTAGCGATG CTGACGAATC ACCGGCTAAG TAA
 
Protein sequence
MSDMAKNLIL WVVIAVVLMS VFQGYSPSSS TKQKMDYSTF LDDVRSGQIN TVEVKSDQRT 
IEGTTTTGEK FVTIMPMPDL DLINDLDRKG IMMKGQEAEE SGFLTQIFIS WFPMLLLIGV
WIFFMRQMQG GGGKGAMSFG KSKAKLMSED QIKTTFGDVA GCDEAKEDVK ELVDYLKEPT
RFQKLGGRIP TGVLLVGPPG TGKTLLAKAI AGEAKVPFFT ISGSDFVEMF VGVGASRVRD
MFEQAKKSAP CIIFIDEIDA VGRQRGAGVG GGHDEREQTL NQMLVEMDGF EGNEGIIVIA
ATNRPDVLDA ALLRPGRFDR QVVVGLPDVR GREQILKVHM RKVPLADGVK ASVIARGTPG
FSGADLANLV NEAALFAARN SRRVVGMEEF ESAKDKIMMG AERRTMVMSE DEKEMTAYHE
AGHAIVGCLV PEHDPVHKVT IIPRGRALGV TFFLPEADAI SQSRRKLESQ ISVAYGGRIA
EDIIYGSEKV STGASQDIKY ATSIARNMVT QWGFSEKLGP VLYAEDENEV FLGRSMGKSQ
HMSDDTARVI DAEVKLLIDA NYGRAHTFLT ENMDILHAMK DALMKYETID SEQIADLMAR
REVRMPAEWQ KDLQSKDNDN NDTSSEKKED IKEVEEEKPD VSDADESPAK