| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3021 |
|---|
| Symbol | |
|---|
| ID | 5663411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3703107 |
|---|
| End bp | 3704237 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237660 |
|---|
| Product | S-(hydroxymethyl)glutathione dehydrogenase |
|---|
| Protein accession | YP_001502873 |
|---|
| Protein GI | 157962839 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA AAACAATCAA ATCAAAAGCC GCAGTTGCTT GGGCCGTTGG CGAGCCACTA
ACGATGGAAA TCGTTGATGT TATGCCACCT CAAAAGGGCG AAGTGCGTAT TAAGATGATT
GCAACAGGTG TATGTCACAC AGACGCATTC ACCCTTTCCG GTGACGATCC TGAAGGGATC
TTCCCATGTA TTCTTGGTCA TGAAGGTGGC GGTATCGTCG AATCTATTGG CGAAGGTGTT
ACGAGCGTTA AAGTGGGCGA TCACGTGATC CCTCTTTATA CTCCAGAATG TGGTGAGTGT
AAGTACTGTA AGTCTGGTAA GACAAACCTT TGCCAGCAAA TCCGTGAAAC TCAAGGTAAA
GGCTTAATGC CTGATGGCAC CACTCGCTTT TCAAAAGATG GCGTAGATAT TTTCCATTAC
ATGGGCACCT CGACTTTCTC TGAATACACA GTATTACCTG AGATTTCACT CGCGAAAGTG
AATCCTGATG CACCACTTGA AGAAGTATGT CTACTAGGTT GTGGTGTAAC AACGGGTATG
GGCGCGGTAA TGAACACCGC CAAAGTAGAA GAAGGCTCAA CTGTTGCAGT ATTTGGCATG
GGCGGTATTG GCTTGTCAGC CATTATCGGT GCAGTGATGG CTAAAGCGTC ACGTATTATT
GCTATCGACA TTAATGAAAG CAAGTTTGAG CTAGCTCGTA AGCTTGGCGC AACAGACTGC
ATCAACCCAA AAGACTACGA TAAGCCTATT CAAGAAGTGA TCATTGAGCT CACTGACGGT
GGTGTTGATT ACTCATTTGA GTGTATCGGT AACGTTCATG TAATGCGTAG TGCACTTGAG
TGCTGCCATA AAGGCTGGGG CGAGTCGGTT GTTATCGGTG TTGCTGGTGC AGGCCAAGAG
ATCTCAACTC GTCCATTCCA ACTTGTGACC GGTCGAGTAT GGAAAGGTAG TGCATTTGGT
GGCGTTAAAG GCCGCTCTGA ACTGCCAGAA TATGTAGAGC GTTACATGGC GGGCGAATTC
AAGTTAGATG ACTTCATCAC TCATACTATG GGGCTTGAGC AAGTAAACGA CGCGTTTGAC
CTAATGCACG AAGGTAAGAG TATCCGTACT GTGCTTCACT TTGACAAATA G
|
|---|
| Protein sequence | MTAKTIKSKA AVAWAVGEPL TMEIVDVMPP QKGEVRIKMI ATGVCHTDAF TLSGDDPEGI
FPCILGHEGG GIVESIGEGV TSVKVGDHVI PLYTPECGEC KYCKSGKTNL CQQIRETQGK
GLMPDGTTRF SKDGVDIFHY MGTSTFSEYT VLPEISLAKV NPDAPLEEVC LLGCGVTTGM
GAVMNTAKVE EGSTVAVFGM GGIGLSAIIG AVMAKASRII AIDINESKFE LARKLGATDC
INPKDYDKPI QEVIIELTDG GVDYSFECIG NVHVMRSALE CCHKGWGESV VIGVAGAGQE
ISTRPFQLVT GRVWKGSAFG GVKGRSELPE YVERYMAGEF KLDDFITHTM GLEQVNDAFD
LMHEGKSIRT VLHFDK
|
|---|
| |