| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2953 |
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| Symbol | |
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| ID | 5663343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3615440 |
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| End bp | 3616834 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237592 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_001502805 |
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| Protein GI | 157962771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTTC ACTCAAAAGA TACTGTGCGA GATGACCTCT TAGATGATAT CTACTCATCG
TCTGACTTAG CTTTATCCAT GCCTAAATAT AAGATGCCTG AGCAGGAAAA TAATCCACGT
CATGCATATC AAATCGTACA CGACGAGCTG ATGATGGACG GAAACTCCCG TCAAAATCTA
GCGACATTTT GCCAAACTTG GGTTGAGGAT GAAGTTCATC AATTGATGGA CGAATGTATC
GATAAGAATA TGATCGATAA AGATGAGTAC CCTCAAACTG CAGAGCTTGA AGCCCGTTGC
GTGCATATGC TTGCCGACCT TTGGAACTCT CCCGACGCTG AAAATACCTT AGGCTGCTCA
ACCACTGGCT CGAGTGAGGC TGCGATGCTC GGTGGTATGG CATTGAAATG GGCTTGGCGT
AAGAAGATGA AAGCGTTAGG TAAACCAACG GATAAACCCA ATATGGTTTG TGGACCGGTG
CAAGTTTGCT GGCATAAATT CGCGCGCTAT TGGGATATAG AGTTACGTGA GATCCCGATG
GAAGGCGATC GTTTAATCAT GAATGCTGAA GAAGTGATTA AGCGCTGCGA TGAAAATACC
ATAGGTGTTG TACCGACTTT AGGGGTGACG TTCACCTGTC AGTACGAGCC TGTAAAGGCG
GTACATGATG CGCTCGATAA GTTGCAAAAA GAGACTGGAC TGGATATTCC AATGCATGTT
GATGCCGCCA GTGGAGGCTT CTTAGCGCCA TTTTGCCAAC CAGAACTAGA ATGGGACTTT
AAATTACCAA GGGTAAAATC AATTAATGCG TCTGGGCATA AATTTGGCTT GAGCCCTCTT
GGTGTGGGTT GGGTTATTTG GCGCGATGCG TCGGCCTTAG ATGAAGACCT TATTTTTAAT
GTGAACTACC TTGGCGGTAA CATGCCGACC TTTGCGCTGA ACTTCTCTCG ACCTGGTGGA
CAGATAGTTG CGCAATACTA CAACTTTTTG CGCTTAGGTA AAGAAGGCTA CAGAAAAATC
CATCAGGCTT GTTACGACAC CGCGCAATAC CTGTCGAGTG AGATTGAGAA ACTGGGGATG
TTCGAGATCA TTTATGATGG TCATGACGGG ATCCCTGCGA TGAGTTGGTC GTTAAAAGAG
GGCGTTGACC CAGGGTTTAA CTTGTTTGAT CTCTCTGATC GTATCCGTTC TCGAGGCTGG
CAGATTGCGG CCTATGCCAT GCCGCCGAAG AGAGAGGATT TAGTCATTAT GCGTATTCTG
GTACGGCATG GGTTTAGCCG AGATCAAGCG GACTTATTAG TAGCTGACTT GAAGCACTGT
GTTGAATTTT TTGCCGAACA CCCAATTTCA CATGGTAGTG ATGCCAAAGA GTCGTCTGGC
TTTAATCATG GTTAA
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| Protein sequence | MPLHSKDTVR DDLLDDIYSS SDLALSMPKY KMPEQENNPR HAYQIVHDEL MMDGNSRQNL
ATFCQTWVED EVHQLMDECI DKNMIDKDEY PQTAELEARC VHMLADLWNS PDAENTLGCS
TTGSSEAAML GGMALKWAWR KKMKALGKPT DKPNMVCGPV QVCWHKFARY WDIELREIPM
EGDRLIMNAE EVIKRCDENT IGVVPTLGVT FTCQYEPVKA VHDALDKLQK ETGLDIPMHV
DAASGGFLAP FCQPELEWDF KLPRVKSINA SGHKFGLSPL GVGWVIWRDA SALDEDLIFN
VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGKEGYRKI HQACYDTAQY LSSEIEKLGM
FEIIYDGHDG IPAMSWSLKE GVDPGFNLFD LSDRIRSRGW QIAAYAMPPK REDLVIMRIL
VRHGFSRDQA DLLVADLKHC VEFFAEHPIS HGSDAKESSG FNHG
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