Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2952 |
Symbol | |
ID | 5663342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3613640 |
End bp | 3615379 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237591 |
Product | YidE/YbjL duplication |
Protein accession | YP_001502804 |
Protein GI | 157962770 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT CTGAGTTATT CAGTTTTGTG TTTAGTTATA TCGCTCATAA CCCCTTCGTA TTTTTGTTTT TAGCCATCGC TATCGGTTAC CCACTGGGAA AAATTTCTAT CAAGGGAATA GCGCTAGGCT CTACAGCCGG AACCTTAGTC GTTGGTGTTG CTATCGCCCT GACGGCTTTT TCTGTTTATG GCTTGAAAAT CGAAGAACCC GGATTAGTGT CTGACATTTT CTTGATGATG TTTATGTATG CGATAGGCAT GAAGGTAGGG CCACAGTTTT TCTCCGGCCT TGCCAGAGGC GGGCTCGACT TTGTTGTGAT AGGCCTGATC GTGGTCTTTA GTAACTTTCT TATTGTATTT TTCGGAGCAA AATTACTCGG TTTAGCACCG GGTTATGCTG CAGGGATCAT CTCGGGCAGT TACACGGTAA CTGCCGTGAT GGGGGTTGCT CAATCTGCTA TCTCATCTGG TGCGTTTAAG GCGCCAGCAG GCATGACCTT AGATCAAGTC AGCGCTAATA TTGCCGCGGG TTATGCTATT AGCTATGTCT TATCCAGTGT TTTCATTATT TTACTTATTA AGTATTTACC AGCGATGTTT GGTATCGATC CCGTTAAGGC GGGTAAAGAT GCTGAGGCAG AATTTGGCGT AGGTGATGAT GTTGAGGCGC TGCCAAGTAC TAATGGATTC TCAAACCTTG GTGTATTGCC GTTAGACATT CGCGCCTATC GGGTAGAGCA CCAAGAGTTA GTTGGTCAAA GCGTTGAGTC ACTGTTTAAG AAGTTTCCCC ATGCCGCGAT TTTAAAAGTG GTTCGAGGCG AGCAAGTATT TGATGCTGCT GATAATCCAA AACTCGCCTT AGGTGATGTT ATCGGTATTC GAGGCGACTA TCATGTTTTG ATAGACGATG GTGCTTTTGT TGGTGTAGAG GTCGATGAGC CTAGAGCTAG AAACGTCGAC ATTGAAGTGG CTGATATTCA TCTAGGTAAG TCAGGATATA CTGGTAAGAC GATTGCTCAA ATTAGCGATG AGGTGGGCTT TGGCGTTTAC ATTAAAGCGC TGTTTAGACA AGGGCACCAG CTACCCGTTA CCCAGCAAGC AGTTGTCGAA GTTGGCGATG TATTGCGAGT TGCCGGATCG GATTGGTGCG TTCAGCAAGT CGCTAAAAAG TTAAATAGTA CACCGATAGT AGAAAGTACC TTAACGGAAA CTTTTTACCT AGCCATATCC TTGCTGATTG GTTATGTATG CGGACATTTT AGCGTGACCT TAGGTGGGAT CCCTTTTGCA TTAGGCACCT CTGCGGGCTG TATGTTAACC GGGATTATAT TTTCCTTCTT AAGGACTCGT AACCCGGCCT TTGGTGGTCC TATGAGTGAA GGCGCAAGAA GCTTCTTACA AGATATCGGC TTAAGCTTAT TTGTCGCGGT ACTTGCTGCA ACGGTTGGCC CTAAGATTCT GGCTTCATTT CAAGGTATTG TGGTGATTAA AATCGCGGCT CTTGGTTTAA CTGCTGCACT TGTTCCTCCT TTGTTAGCTT GGCTATATGG CTTGTATTTC CGCAAGATGA ACCCTGCGAT ATTGGCTGGC GCCTGCGCCG GTGGACGTAA TAGCACGCCT GCAATGAAAG GGGCTCAAGA TGTATGTCAA AGTGATATGC CAGCGGTTGG CTACCCTGTA CCTTATGCAC TCACCTCTAT GATAGTGCTG GTATTAGGCT ATTTAACTAT GGTGCTTTAG
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Protein sequence | MNISELFSFV FSYIAHNPFV FLFLAIAIGY PLGKISIKGI ALGSTAGTLV VGVAIALTAF SVYGLKIEEP GLVSDIFLMM FMYAIGMKVG PQFFSGLARG GLDFVVIGLI VVFSNFLIVF FGAKLLGLAP GYAAGIISGS YTVTAVMGVA QSAISSGAFK APAGMTLDQV SANIAAGYAI SYVLSSVFII LLIKYLPAMF GIDPVKAGKD AEAEFGVGDD VEALPSTNGF SNLGVLPLDI RAYRVEHQEL VGQSVESLFK KFPHAAILKV VRGEQVFDAA DNPKLALGDV IGIRGDYHVL IDDGAFVGVE VDEPRARNVD IEVADIHLGK SGYTGKTIAQ ISDEVGFGVY IKALFRQGHQ LPVTQQAVVE VGDVLRVAGS DWCVQQVAKK LNSTPIVEST LTETFYLAIS LLIGYVCGHF SVTLGGIPFA LGTSAGCMLT GIIFSFLRTR NPAFGGPMSE GARSFLQDIG LSLFVAVLAA TVGPKILASF QGIVVIKIAA LGLTAALVPP LLAWLYGLYF RKMNPAILAG ACAGGRNSTP AMKGAQDVCQ SDMPAVGYPV PYALTSMIVL VLGYLTMVL
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