| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2890 |
|---|
| Symbol | |
|---|
| ID | 5663281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3529514 |
|---|
| End bp | 3529978 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237530 |
|---|
| Product | flavodoxin |
|---|
| Protein accession | YP_001502743 |
|---|
| Protein GI | 157962709 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0716] Flavodoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TGAATCTAGT TTTTGGGACA GTTTATGGTG GCGCTCAATA CGTTGCAGAG
ATGCTTGAGC AGGCTTTGCT TGAGTTAGGC CGAGAGACTT GTCTTTACCA ACCAGAGCAA
CTTGTCGGTT TTGTACCACC TGAAGACGAG CTGCTCTTAA TCATCTGCTC CACAACCGGC
CAAGGTGATC TTCCGGATGA TATTCAGCCT TGGTTTAACG AGATGAAATC GAAGGCTCCT
TATCTACCTA AGCTTAAGTT TGGATTGATT GGGTTAGGGG ATTCTAGCTA TGAAACCTAC
TGCGGTGCGG CAGAGCAACT CTTAGGTCTA TTTGAAGAGT TAGGGGCGAA ACAGCTAGGA
GAGTTTTTAA AAATAGACGC GGGTGAAACA ATGGAGCCTG AAGTCGAGGC CCTAGCTTGG
CTACCGTGTT GGAATCTGCT GATAGATACC GAACTTGCTG CTTAA
|
|---|
| Protein sequence | MKKVNLVFGT VYGGAQYVAE MLEQALLELG RETCLYQPEQ LVGFVPPEDE LLLIICSTTG
QGDLPDDIQP WFNEMKSKAP YLPKLKFGLI GLGDSSYETY CGAAEQLLGL FEELGAKQLG
EFLKIDAGET MEPEVEALAW LPCWNLLIDT ELAA
|
|---|
| |